Run SpaNorm spatial normalization

Normalize spatial transcriptomics counts using SpaNorm and store the normalized expression in a Seurat assay.

Usage

RunSpaNorm(
  object,
  assay = NULL,
  layer = "counts",
  image = NULL,
  coord.cols = c("col", "row"),
  new_assay = "SpaNorm",
  tool_name = "SpaNorm",
  store_results = TRUE,
  store_spe = FALSE,
  verbose = TRUE,
  coordinate_space = c("raw", "legacy_display"),
  ...,
  srt = NULL
)

Arguments

object

A Seurat object.

assay

Assay to use. NULL uses the default assay.

layer

Assay layer used for expression values.

image

Spatial image name. Required when multiple images are present; a single image is selected automatically when NULL.

coord.cols

Metadata coordinate columns used when no image is available.

new_assay

Name of the assay used to store SpaNorm-normalized data.

tool_name

Name used to store detailed SpaNorm results in srt@tools.

store_results

Whether to store the full result in srt@tools.

store_spe

Whether to store the backend SpatialExperiment returned by SpaNorm.

verbose

Whether to print the message. Default is TRUE.

coordinate_space

Coordinate system supplied to SpaNorm. The default is raw acquisition coordinates; use "legacy_display" explicitly to reproduce the display-scaled coordinates used before scop 0.9.0.

...

Additional arguments passed to SpaNorm::SpaNorm(), such as sample.p.

srt

Deprecated alias for object; supply exactly one of the two. It will be removed in scop 1.0.0.

Value

A Seurat object with SpaNorm-normalized expression stored in new_assay. When store_results = TRUE, parameters, coordinates, features, cells, and optional backend output are stored in srt@tools[[tool_name]].

Examples

data(visium_human_pancreas_sub)
keep_spots <- unique(round(seq(
  1,
  ncol(visium_human_pancreas_sub),
  length.out = 300
)))
spatial <- visium_human_pancreas_sub[, keep_spots]
spatial <- RunSpaNorm(
  spatial,
  assay = "Spatial",
  layer = "counts",
  coord.cols = c("x", "y"),
  new_assay = "SpaNorm",
  store_spe = FALSE,
  sample.p = 0.5,
  verbose = FALSE
)
#> (1/2) Fitting SpaNorm model
#> 150 cells/spots sampled to fit model
#> Downloading uv...
#> Done!
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> iter:  1, estimating gene-wise dispersion
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> iter:  1, log-likelihood: -887831.395451
#> iter:  1, fitting NB model
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> iter:  1, iter:  1, log-likelihood: -887831.395451
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> iter:  1, iter:  2, log-likelihood: -720403.295904
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> iter:  1, iter:  3, log-likelihood: -678640.607394
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> iter:  1, iter:  4, log-likelihood: -665863.499198
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> iter:  1, iter:  5, log-likelihood: -661394.133688
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> iter:  1, iter:  6, log-likelihood: -658702.175115
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> iter:  1, iter:  7, log-likelihood: -657217.187147
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> iter:  1, iter:  8, log-likelihood: -655541.827471
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> iter:  1, iter:  9, log-likelihood: -654912.102881
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> iter:  1, iter: 10, log-likelihood: -654745.935523
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> iter:  1, iter: 10, log-likelihood: -654745.935523
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> iter:  1, iter: 10, log-likelihood: -654745.935523
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> iter:  1, iter: 11, log-likelihood: -654745.935523 (converged)
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> iter:  2, estimating gene-wise dispersion
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> iter:  2, log-likelihood: -645042.838569
#> iter:  2, fitting NB model
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> iter:  2, iter:  1, log-likelihood: -645042.838569
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> iter:  2, iter:  2, log-likelihood: -642726.403731
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> iter:  2, iter:  2, log-likelihood: -642726.403731
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> iter:  2, iter:  2, log-likelihood: -642726.403731
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> iter:  2, iter:  3, log-likelihood: -642726.403731 (converged)
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> iter:  3, estimating gene-wise dispersion
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> iter:  3, log-likelihood: -642054.487043
#> iter:  3, fitting NB model
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> iter:  3, iter:  1, log-likelihood: -642054.487043
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> iter:  3, iter:  1, log-likelihood: -642054.487043
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> iter:  3, iter:  1, log-likelihood: -642054.487043
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> iter:  3, iter:  2, log-likelihood: -642054.487043
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> iter:  3, iter:  2, log-likelihood: -642054.487043
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> iter:  3, iter:  2, log-likelihood: -642054.487043
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> iter:  3, iter:  3, log-likelihood: -642054.487043 (converged)
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> iter:  4, estimating gene-wise dispersion
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> iter:  4, log-likelihood: -642054.487043
#> iter:  4, fitting NB model
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> iter:  4, iter:  1, log-likelihood: -642054.487043
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> iter:  4, iter:  1, log-likelihood: -642054.487043
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> iter:  4, iter:  1, log-likelihood: -642054.487043
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> iter:  4, iter:  2, log-likelihood: -642054.487043
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> iter:  4, iter:  2, log-likelihood: -642054.487043
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> iter:  4, iter:  2, log-likelihood: -642054.487043
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> iter:  4, iter:  3, log-likelihood: -642054.487043 (converged)
#> Hint: To use tensorflow with `py_require()`, call `py_require("tensorflow")` at the start of the R session
#> iter:  5, log-likelihood: -642054.487043 (converged)
#> (2/2) Normalising data
SpatialSpotPlot(
  spatial,
  features = rownames(spatial[["SpaNorm"]])[1],
  assay = "SpaNorm",
  layer = "data",
  overlay_image = FALSE,
  coord.cols = c("x", "y")
)