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This function performs cell scoring on a Seurat object. It calculates scores for a given set of features and stores them in meta.data and/or a score assay, depending on new_assay and store_metadata.

Usage

CellScoring(
  srt,
  features = NULL,
  layer = "data",
  assay = NULL,
  split.by = NULL,
  IDtype = "symbol",
  species = "Homo_sapiens",
  db = "GO_BP",
  termnames = NULL,
  db_update = FALSE,
  db_version = "latest",
  convert_species = TRUE,
  Ensembl_version = NULL,
  mirror = NULL,
  minGSSize = 10,
  maxGSSize = 500,
  method = "Seurat",
  backend = c("cpp", "r"),
  cpp_strategy = c("sparse", "aucell", "topk", "full"),
  classification = TRUE,
  name = "",
  new_assay = FALSE,
  store_metadata = NULL,
  seed = 11,
  cores = 1,
  verbose = TRUE,
  ...
)

Arguments

srt

A Seurat object.

features

A named list of feature lists for scoring. If NULL, db will be used to create features sets.

layer

Which layer to use. Default is data.

assay

Which assay to use. If NULL, the default assay of the Seurat object will be used. When the object also contains ChromatinAssay, the default assay and additional ChromatinAssay will be preprocessed sequentially.

split.by

Name of a column in meta.data column to split plot by. Default is NULL.

IDtype

A character vector specifying the type of gene IDs in the srt object or geneID argument. This argument is used to convert the gene IDs to a different type if IDtype is different from result_IDtype.

species

A character vector specifying the species for which the gene annotation databases should be prepared. Can be "Homo_sapiens" or "Mus_musculus".

db

A character vector specifying the annotation sources to be included in the gene annotation databases. Can be one or more of "GO", "GO_BP", "GO_CC", "GO_MF", "KEGG", "WikiPathway", "Reactome", "CORUM", "MP", "DO", "HPO", "PFAM", "CSPA", "Surfaceome", "SPRomeDB", "VerSeDa", "TFLink", "hTFtarget", "TRRUST", "JASPAR", "ENCODE", "MSigDB", "CellTalk", "CellChat", "Chromosome", "GeneType", "Enzyme", "TF", "CytoTRACE2". MSigDB subcollections can be requested as "MSigDB_<collection>", such as "MSigDB_H" for human Hallmark and "MSigDB_MH" for mouse Hallmark. Note: "CytoTRACE2" is species-independent and downloads pre-trained model data required by RunCytoTRACE.

termnames

A vector of term names to be used from the database. Default is NULL, in which case all features from the database are used.

db_update

Whether the gene annotation databases should be forcefully updated. If set to FALSE, the function will attempt to load the cached databases instead. Default is FALSE.

db_version

A character vector specifying the version of the gene annotation databases to be retrieved. Default is "latest".

convert_species

Whether to use a species-converted database when the annotation is missing for the specified species. Default is TRUE.

Ensembl_version

An integer specifying the Ensembl version. Default is NULL. If NULL, the latest version will be used.

mirror

Specify an Ensembl mirror to connect to. The valid options here are "www", "uswest", "useast", "asia".

minGSSize

The minimum size of a gene set to be considered in the enrichment analysis.

maxGSSize

The maximum size of a gene set to be considered in the enrichment analysis.

method

The method to use for scoring. Can be "Seurat", "AUCell", "UCell", "GSVA", "ssGSEA", "zscore", "PLAGE", or "VISION". Multiple methods can be supplied at once; in that case each method is run separately and stored with a method suffix such as "GO_AUCell" or "GO_GSVA". Default is "Seurat".

backend

Scoring backend. "cpp" is the default for supported methods. "r" uses the original package implementation. "cpp" currently supports method = "Seurat", method = "AUCell", method = "GSVA", method = "ssGSEA", method = "zscore", and method = "PLAGE". method = "UCell" and method = "VISION" fall back to "r" when backend is not explicitly set.

cpp_strategy

AUCell scoring strategy used when backend = "cpp". "sparse" ranks non-zero genes and approximates zero ties without densifying the expression matrix. "aucell" calls the official AUCell::AUCell_buildRankings() and AUCell::AUCell_calcAUC() path for exact consistency with the R backend, "topk" ranks only genes that can contribute to AUCell AUC, and "full" ranks all genes.

classification

Whether to perform classification based on the scores. Default is TRUE.

name

The name of the assay to store the scores in. Only used if new_assay is TRUE. Default is "".

new_assay

Whether to create a new assay for storing the scores. Default is FALSE.

store_metadata

Whether to also store score columns in meta.data. When NULL, manual features = list(...) input is stored in meta.data by default, while database-derived results stay assay-only when new_assay = TRUE.

seed

Random seed for reproducibility. Default is 11.

cores

The number of cores to use for parallelization with foreach::foreach. Default is 1.

verbose

Whether to print the message. Default is TRUE.

...

Additional arguments to be passed to the scoring methods.

Examples

data(pancreas_sub)
pancreas_sub <- standard_scop(pancreas_sub)
#>  [2026-07-02 08:28:44] Start standard processing workflow...
#>  [2026-07-02 08:28:44] Checking a list of <Seurat>...
#> ! [2026-07-02 08:28:44] Data 1/1 of the `srt_list` is "unknown"
#>  [2026-07-02 08:28:44] Perform `NormalizeData()` with `normalization.method = 'LogNormalize'` on 1/1 of `srt_list`...
#>  [2026-07-02 08:28:45] Perform `FindVariableFeatures()` on 1/1 of `srt_list`...
#>  [2026-07-02 08:28:45] Use the separate HVF from `srt_list`
#>  [2026-07-02 08:28:45] Number of available HVF: 2000
#>  [2026-07-02 08:28:45] Finished check
#>  [2026-07-02 08:28:45] Perform `ScaleData()`
#>  [2026-07-02 08:28:45] Perform pca linear dimension reduction
#>  [2026-07-02 08:28:46] Use stored estimated dimensions 1:23 for Standardpca
#>  [2026-07-02 08:28:46] Perform `Seurat::FindClusters()` with `cluster_algorithm = 'louvain'` and `cluster_resolution = 0.6`
#>  [2026-07-02 08:28:46] Reorder clusters...
#>  [2026-07-02 08:28:46] Skip `log1p()` because `layer = data` is not "counts"
#>  [2026-07-02 08:28:46] Perform umap nonlinear dimension reduction
#>  [2026-07-02 08:28:50] Standard processing workflow completed
features_all <- rownames(pancreas_sub)
pancreas_sub <- CellScoring(
  pancreas_sub,
  features = list(
    A = features_all[1:100],
    B = features_all[101:200]
  ),
  method = "AUCell",
  name = "test"
)
#>  [2026-07-02 08:28:50] Start cell scoring
#>  [2026-07-02 08:28:50] Data type is log-normalized
#>  [2026-07-02 08:28:50] Number of feature lists to be scored: 2
#>  [2026-07-02 08:28:51] Cell scoring completed
CellDimPlot(pancreas_sub, "test_classification")


FeatureDimPlot(
  pancreas_sub,
  features = "test_A"
)


pancreas_sub <- CellScoring(
  pancreas_sub,
  features = list(A = features_all[1:100]),
  method = c("AUCell", "GSVA")
)
#>  [2026-07-02 08:28:51] Start cell scoring
#>  [2026-07-02 08:28:51] Start cell scoring
#>  [2026-07-02 08:28:51] Data type is log-normalized
#>  [2026-07-02 08:28:52] Number of feature lists to be scored: 1
#>  [2026-07-02 08:28:52] Cell scoring completed
#>  [2026-07-02 08:28:52] Start cell scoring
#>  [2026-07-02 08:28:52] Data type is log-normalized
#>  [2026-07-02 08:28:52] Number of feature lists to be scored: 1
#>  2516278 nonzeros (less than 2^31) and 84.27% sparsity
#>  [2026-07-02 08:30:17] Cell scoring completed
FeatureStatPlot(
  pancreas_sub,
  stat.by = c("AUCell_A", "GSVA_A"),
  group.by = "CellType",
  plot.by = "feature",
  plot_type = "violin",
  stack = TRUE
)
#>  [2026-07-02 08:30:17] Setting `group.by` to "Features" as `plot.by` is set to "feature"


FeatureDimPlot(
  pancreas_sub,
  features = c("AUCell_A", "GSVA_A"),
  xlab = "UMAP_1",
  ylab = "UMAP_2"
)


GroupHeatmap(
  pancreas_sub,
  features = c("AUCell_A", "GSVA_A", "Sox9", "Anxa2", "Bicc1"),
  group.by = "CellType"
)
#> $plot

#> 
#> $g_tree
#> gTree[GRID.gTree.11663] 
#> 
#> $matrix_list
#> $matrix_list$CellType
#>              Ductal Ngn3-high-EP  Endocrine Ngn3-low-EP Pre-endocrine
#> AUCell_A -0.6898028    0.6814256 -0.2740940  -1.0721911     1.3546623
#> GSVA_A    0.5904666    0.5803752 -1.7700722   0.2694525     0.3297779
#> Sox9      1.4288723   -0.6125486 -0.7946666   0.6788737    -0.7005309
#> Anxa2     1.1467252   -0.6170844 -0.7867363   1.0374551    -0.7803596
#> Bicc1     1.1109781   -0.6764747 -0.7375937   1.0784037    -0.7753133
#> attr(,"scaled:center")
#>   AUCell_A     GSVA_A       Sox9      Anxa2      Bicc1 
#> 0.01920529 0.10872510 1.96420268 2.04845477 1.94117464 
#> attr(,"scaled:scale")
#>     AUCell_A       GSVA_A         Sox9        Anxa2        Bicc1 
#> 0.0007646939 0.0184930194 2.1633376549 2.5428690690 2.3797100097 
#> 
#> 
#> $feature_split
#> NULL
#> 
#> $cell_metadata
#>                             cells      CellType
#> AAACCTGAGCCTTGAT AAACCTGAGCCTTGAT        Ductal
#> AAACCTGGTAAGTGGC AAACCTGGTAAGTGGC  Ngn3-high-EP
#> AAACGGGAGATATGGT AAACGGGAGATATGGT        Ductal
#> AAACGGGCAAAGAATC AAACGGGCAAAGAATC     Endocrine
#> AAACGGGGTACAGTTC AAACGGGGTACAGTTC     Endocrine
#> AAACGGGTCAGCTCTC AAACGGGTCAGCTCTC   Ngn3-low-EP
#> AAACGGGTCGCATGGC AAACGGGTCGCATGGC     Endocrine
#> AAAGATGAGTCATGCT AAAGATGAGTCATGCT     Endocrine
#> AAAGATGAGTCTTGCA AAAGATGAGTCTTGCA     Endocrine
#> AAAGCAAAGCTACCTA AAAGCAAAGCTACCTA Pre-endocrine
#> AAAGCAACACATGGGA AAAGCAACACATGGGA        Ductal
#> AAAGCAAGTGCAGTAG AAAGCAAGTGCAGTAG     Endocrine
#> AAATGCCAGACTAAGT AAATGCCAGACTAAGT     Endocrine
#> AAATGCCCAATGGAAT AAATGCCCAATGGAAT     Endocrine
#> AAATGCCCACCAACCG AAATGCCCACCAACCG  Ngn3-high-EP
#> AAATGCCCATGCTAGT AAATGCCCATGCTAGT  Ngn3-high-EP
#> AAATGCCGTGATAAGT AAATGCCGTGATAAGT     Endocrine
#> AACACGTGTCGACTGC AACACGTGTCGACTGC Pre-endocrine
#> AACCATGCACAGGAGT AACCATGCACAGGAGT  Ngn3-high-EP
#> AACCATGGTTCGGCAC AACCATGGTTCGGCAC  Ngn3-high-EP
#> AACCATGGTTGAACTC AACCATGGTTGAACTC Pre-endocrine
#> AACGTTGGTGCCTTGG AACGTTGGTGCCTTGG        Ductal
#> AACTCAGGTGCCTGTG AACTCAGGTGCCTGTG  Ngn3-high-EP
#> AACTCAGGTTGGAGGT AACTCAGGTTGGAGGT        Ductal
#> AACTCAGTCCTCGCAT AACTCAGTCCTCGCAT  Ngn3-high-EP
#> AACTCAGTCTGGTTCC AACTCAGTCTGGTTCC        Ductal
#> AACTCCCCAGTTCATG AACTCCCCAGTTCATG     Endocrine
#> AACTCCCTCGAGAGCA AACTCCCTCGAGAGCA        Ductal
#> AACTCTTCATTTGCCC AACTCTTCATTTGCCC     Endocrine
#> AACTGGTGTGCCTGTG AACTGGTGTGCCTGTG        Ductal
#> AACTGGTTCTTACCGC AACTGGTTCTTACCGC        Ductal
#> AACTTTCCACAGTCGC AACTTTCCACAGTCGC  Ngn3-high-EP
#> AACTTTCCACTGCCAG AACTTTCCACTGCCAG        Ductal
#> AACTTTCGTGACCAAG AACTTTCGTGACCAAG   Ngn3-low-EP
#> AACTTTCTCCAGATCA AACTTTCTCCAGATCA     Endocrine
#> AAGACCTAGACCTTTG AAGACCTAGACCTTTG     Endocrine
#> AAGACCTAGTAGGCCA AAGACCTAGTAGGCCA  Ngn3-high-EP
#> AAGACCTCAGGTTTCA AAGACCTCAGGTTTCA        Ductal
#> AAGCCGCAGGCAGGTT AAGCCGCAGGCAGGTT        Ductal
#> AAGCCGCCAATGGACG AAGCCGCCAATGGACG  Ngn3-high-EP
#> AAGGAGCAGTACATGA AAGGAGCAGTACATGA     Endocrine
#> AAGGCAGAGCTGAAAT AAGGCAGAGCTGAAAT        Ductal
#> AAGGCAGTCCGAGCCA AAGGCAGTCCGAGCCA   Ngn3-low-EP
#> AAGGTTCAGATAGTCA AAGGTTCAGATAGTCA     Endocrine
#> AAGGTTCAGGAGCGAG AAGGTTCAGGAGCGAG     Endocrine
#> AAGGTTCGTCAACTGT AAGGTTCGTCAACTGT Pre-endocrine
#> AAGTCTGGTTGGGACA AAGTCTGGTTGGGACA     Endocrine
#> AAGTCTGTCCGAGCCA AAGTCTGTCCGAGCCA  Ngn3-high-EP
#> AATCCAGAGGGTTCCC AATCCAGAGGGTTCCC Pre-endocrine
#> AATCCAGTCAGGTTCA AATCCAGTCAGGTTCA Pre-endocrine
#> AATCCAGTCGGTCCGA AATCCAGTCGGTCCGA Pre-endocrine
#> AATCGGTCATATGGTC AATCGGTCATATGGTC  Ngn3-high-EP
#> AATCGGTTCCAAACTG AATCGGTTCCAAACTG  Ngn3-high-EP
#> AATCGGTTCGTATCAG AATCGGTTCGTATCAG     Endocrine
#> ACACCAAGTATAGGTA ACACCAAGTATAGGTA     Endocrine
#> ACACCCTAGGACAGCT ACACCCTAGGACAGCT  Ngn3-high-EP
#> ACACCCTTCCCAGGTG ACACCCTTCCCAGGTG Pre-endocrine
#> ACACCGGCATCACGTA ACACCGGCATCACGTA        Ductal
#> ACACCGGCATGTCCTC ACACCGGCATGTCCTC        Ductal
#> ACACCGGTCATGTCTT ACACCGGTCATGTCTT     Endocrine
#> ACACTGAGTCCATGAT ACACTGAGTCCATGAT Pre-endocrine
#> ACAGCCGAGAGAACAG ACAGCCGAGAGAACAG Pre-endocrine
#> ACAGCCGAGAGGTACC ACAGCCGAGAGGTACC     Endocrine
#> ACAGCCGAGTGGTCCC ACAGCCGAGTGGTCCC        Ductal
#> ACAGCCGCATCGTCGG ACAGCCGCATCGTCGG  Ngn3-high-EP
#> ACAGCTAAGTCGTTTG ACAGCTAAGTCGTTTG     Endocrine
#> ACAGCTATCAAGGCTT ACAGCTATCAAGGCTT     Endocrine
#> ACAGCTATCAGCATGT ACAGCTATCAGCATGT        Ductal
#> ACAGCTATCTGGGCCA ACAGCTATCTGGGCCA        Ductal
#> ACATACGAGTAGGCCA ACATACGAGTAGGCCA  Ngn3-high-EP
#> ACATACGGTCTCTCTG ACATACGGTCTCTCTG Pre-endocrine
#> ACATCAGAGAGACTTA ACATCAGAGAGACTTA Pre-endocrine
#> ACATCAGTCCTTGGTC ACATCAGTCCTTGGTC  Ngn3-high-EP
#> ACCAGTAAGTGATCGG ACCAGTAAGTGATCGG     Endocrine
#> ACCAGTAGTTCGTTGA ACCAGTAGTTCGTTGA     Endocrine
#> ACCAGTATCGTTTAGG ACCAGTATCGTTTAGG  Ngn3-high-EP
#> ACCGTAAGTTATCACG ACCGTAAGTTATCACG        Ductal
#> ACCTTTATCCTGCAGG ACCTTTATCCTGCAGG     Endocrine
#> ACGAGCCCATGAGCGA ACGAGCCCATGAGCGA     Endocrine
#> ACGAGGAAGTTACCCA ACGAGGAAGTTACCCA   Ngn3-low-EP
#> ACGAGGATCATCACCC ACGAGGATCATCACCC     Endocrine
#> ACGAGGATCGCCGTGA ACGAGGATCGCCGTGA Pre-endocrine
#> ACGATACAGATGAGAG ACGATACAGATGAGAG     Endocrine
#> ACGATACTCGCGCCAA ACGATACTCGCGCCAA     Endocrine
#> ACGATGTTCGCAGGCT ACGATGTTCGCAGGCT Pre-endocrine
#> ACGCAGCCATTCTCAT ACGCAGCCATTCTCAT Pre-endocrine
#> ACGCAGCGTAATCACC ACGCAGCGTAATCACC  Ngn3-high-EP
#> ACGCCAGGTTACAGAA ACGCCAGGTTACAGAA     Endocrine
#> ACGCCAGTCCCAAGTA ACGCCAGTCCCAAGTA  Ngn3-high-EP
#> ACGCCGAAGGGTGTTG ACGCCGAAGGGTGTTG     Endocrine
#> ACGCCGAGTTTGCATG ACGCCGAGTTTGCATG     Endocrine
#> ACGGCCACACGTGAGA ACGGCCACACGTGAGA        Ductal
#> ACGGGCTGTGCGATAG ACGGGCTGTGCGATAG        Ductal
#> ACGTCAAAGGTGTTAA ACGTCAAAGGTGTTAA     Endocrine
#> ACGTCAACACTGCCAG ACGTCAACACTGCCAG        Ductal
#> ACGTCAACAGACAAAT ACGTCAACAGACAAAT        Ductal
#> ACTATCTGTCAGGACA ACTATCTGTCAGGACA     Endocrine
#> ACTATCTTCAAGATCC ACTATCTTCAAGATCC Pre-endocrine
#> ACTGAACAGCCTCGTG ACTGAACAGCCTCGTG        Ductal
#> ACTGAGTAGTGACTCT ACTGAGTAGTGACTCT        Ductal
#> ACTGATGCATCAGTAC ACTGATGCATCAGTAC  Ngn3-high-EP
#> ACTGATGCATGGTCTA ACTGATGCATGGTCTA     Endocrine
#> ACTGATGCATGTCTCC ACTGATGCATGTCTCC Pre-endocrine
#> ACTGATGGTGAGGGTT ACTGATGGTGAGGGTT        Ductal
#> ACTGATGTCCCTAACC ACTGATGTCCCTAACC   Ngn3-low-EP
#> ACTGCTCAGGTGTTAA ACTGCTCAGGTGTTAA Pre-endocrine
#> ACTGTCCCAGTTTACG ACTGTCCCAGTTTACG Pre-endocrine
#> ACTGTCCTCGCTAGCG ACTGTCCTCGCTAGCG  Ngn3-high-EP
#> ACTTACTAGAGGGCTT ACTTACTAGAGGGCTT  Ngn3-high-EP
#> ACTTACTAGCCGGTAA ACTTACTAGCCGGTAA   Ngn3-low-EP
#> ACTTACTCAATCAGAA ACTTACTCAATCAGAA  Ngn3-high-EP
#> ACTTACTCACATGTGT ACTTACTCACATGTGT     Endocrine
#> ACTTGTTAGTGAAGTT ACTTGTTAGTGAAGTT     Endocrine
#> ACTTGTTAGTTAAGTG ACTTGTTAGTTAAGTG     Endocrine
#> ACTTGTTCATGGTCAT ACTTGTTCATGGTCAT     Endocrine
#> ACTTGTTTCACCCGAG ACTTGTTTCACCCGAG     Endocrine
#> ACTTTCAAGGATATAC ACTTTCAAGGATATAC        Ductal
#> ACTTTCACAACTGCTA ACTTTCACAACTGCTA  Ngn3-high-EP
#> AGAATAGCAATCACAC AGAATAGCAATCACAC     Endocrine
#> AGAATAGCAGTACACT AGAATAGCAGTACACT        Ductal
#> AGACGTTCAATGGTCT AGACGTTCAATGGTCT     Endocrine
#> AGACGTTTCTTACCTA AGACGTTTCTTACCTA   Ngn3-low-EP
#> AGAGCGACAGTAAGAT AGAGCGACAGTAAGAT     Endocrine
#> AGAGCGATCTCTTGAT AGAGCGATCTCTTGAT        Ductal
#> AGAGCTTAGCCGATTT AGAGCTTAGCCGATTT        Ductal
#> AGAGCTTAGGTTACCT AGAGCTTAGGTTACCT  Ngn3-high-EP
#> AGAGCTTGTTAAAGAC AGAGCTTGTTAAAGAC        Ductal
#> AGAGTGGAGGCGATAC AGAGTGGAGGCGATAC     Endocrine
#> AGAGTGGCACCTCGGA AGAGTGGCACCTCGGA Pre-endocrine
#> AGAGTGGGTAGCACGA AGAGTGGGTAGCACGA        Ductal
#> AGAGTGGGTCACCTAA AGAGTGGGTCACCTAA   Ngn3-low-EP
#> AGATCTGTCCGTCAAA AGATCTGTCCGTCAAA Pre-endocrine
#> AGATTGCAGCGTGTCC AGATTGCAGCGTGTCC     Endocrine
#> AGATTGCAGCTGTCTA AGATTGCAGCTGTCTA        Ductal
#> AGATTGCAGTTCCACA AGATTGCAGTTCCACA  Ngn3-high-EP
#> AGATTGCCACCAGGCT AGATTGCCACCAGGCT        Ductal
#> AGCAGCCGTCGCATCG AGCAGCCGTCGCATCG  Ngn3-high-EP
#> AGCAGCCGTGTAACGG AGCAGCCGTGTAACGG  Ngn3-high-EP
#> AGCAGCCTCTTTAGTC AGCAGCCTCTTTAGTC   Ngn3-low-EP
#> AGCATACCACAGCCCA AGCATACCACAGCCCA     Endocrine
#> AGCATACGTCCGCTGA AGCATACGTCCGCTGA     Endocrine
#> AGCGGTCGTACCGAGA AGCGGTCGTACCGAGA  Ngn3-high-EP
#> AGCGGTCGTCGAATCT AGCGGTCGTCGAATCT  Ngn3-high-EP
#> AGCGGTCGTGTATGGG AGCGGTCGTGTATGGG        Ductal
#> AGCGTCGCACAGGCCT AGCGTCGCACAGGCCT  Ngn3-high-EP
#> AGCTCCTCAGTTTACG AGCTCCTCAGTTTACG Pre-endocrine
#> AGCTCCTGTGTGCCTG AGCTCCTGTGTGCCTG        Ductal
#> AGCTCCTTCAATACCG AGCTCCTTCAATACCG  Ngn3-high-EP
#> AGCTCCTTCGCCCTTA AGCTCCTTCGCCCTTA Pre-endocrine
#> AGCTCTCAGACATAAC AGCTCTCAGACATAAC Pre-endocrine
#> AGCTCTCGTTCAGTAC AGCTCTCGTTCAGTAC     Endocrine
#> AGCTTGAAGACACGAC AGCTTGAAGACACGAC  Ngn3-high-EP
#> AGCTTGAAGAGTGACC AGCTTGAAGAGTGACC     Endocrine
#> AGCTTGACAATAGAGT AGCTTGACAATAGAGT   Ngn3-low-EP
#> AGCTTGACAGTAAGAT AGCTTGACAGTAAGAT        Ductal
#> AGCTTGACATCTATGG AGCTTGACATCTATGG     Endocrine
#> AGCTTGAGTGCAGTAG AGCTTGAGTGCAGTAG     Endocrine
#> AGGCCACAGCTGTCTA AGGCCACAGCTGTCTA   Ngn3-low-EP
#> AGGCCACCATGACATC AGGCCACCATGACATC     Endocrine
#> AGGCCGTCACGACGAA AGGCCGTCACGACGAA  Ngn3-high-EP
#> AGGCCGTCACGGTGTC AGGCCGTCACGGTGTC     Endocrine
#> AGGCCGTGTACCAGTT AGGCCGTGTACCAGTT   Ngn3-low-EP
#> AGGGAGTAGGGTATCG AGGGAGTAGGGTATCG  Ngn3-high-EP
#> AGGGAGTAGTGTCTCA AGGGAGTAGTGTCTCA        Ductal
#> AGGGAGTTCCTCAATT AGGGAGTTCCTCAATT     Endocrine
#> AGGGAGTTCGGAGGTA AGGGAGTTCGGAGGTA     Endocrine
#> AGGGATGGTCGACTGC AGGGATGGTCGACTGC     Endocrine
#> AGGGATGGTTAGGGTG AGGGATGGTTAGGGTG  Ngn3-high-EP
#> AGGGATGTCGCATGAT AGGGATGTCGCATGAT     Endocrine
#> AGGGATGTCGCATGGC AGGGATGTCGCATGGC  Ngn3-high-EP
#> AGGGTGAGTGCGAAAC AGGGTGAGTGCGAAAC     Endocrine
#> AGGTCATCACTTCTGC AGGTCATCACTTCTGC     Endocrine
#> AGGTCATGTCTCCCTA AGGTCATGTCTCCCTA     Endocrine
#> AGGTCATGTTTAGGAA AGGTCATGTTTAGGAA Pre-endocrine
#> AGTAGTCCACATGACT AGTAGTCCACATGACT   Ngn3-low-EP
#> AGTAGTCGTGAGGGAG AGTAGTCGTGAGGGAG     Endocrine
#> AGTAGTCGTTCTGTTT AGTAGTCGTTCTGTTT        Ductal
#> AGTCTTTCACCAGGTC AGTCTTTCACCAGGTC        Ductal
#> AGTCTTTCACGGACAA AGTCTTTCACGGACAA     Endocrine
#> AGTCTTTGTTACGGAG AGTCTTTGTTACGGAG     Endocrine
#> AGTGAGGGTTACGGAG AGTGAGGGTTACGGAG        Ductal
#> AGTGAGGTCTCCAACC AGTGAGGTCTCCAACC     Endocrine
#> AGTGGGACAGGTCGTC AGTGGGACAGGTCGTC     Endocrine
#> AGTGGGAGTGGCAAAC AGTGGGAGTGGCAAAC Pre-endocrine
#> AGTGTCATCCCTTGTG AGTGTCATCCCTTGTG Pre-endocrine
#> AGTTGGTAGAGCCTAG AGTTGGTAGAGCCTAG     Endocrine
#> AGTTGGTGTTGTCGCG AGTTGGTGTTGTCGCG Pre-endocrine
#> AGTTGGTTCACATAGC AGTTGGTTCACATAGC  Ngn3-high-EP
#> ATAAGAGCATCGATTG ATAAGAGCATCGATTG        Ductal
#> ATAGACCAGCGTGTCC ATAGACCAGCGTGTCC     Endocrine
#> ATAGACCAGTGATCGG ATAGACCAGTGATCGG     Endocrine
#> ATAGACCTCTAACTGG ATAGACCTCTAACTGG        Ductal
#> ATCACGAGTGCACCAC ATCACGAGTGCACCAC     Endocrine
#> ATCATCTGTGTTTGTG ATCATCTGTGTTTGTG     Endocrine
#> ATCATCTTCTGTCAAG ATCATCTTCTGTCAAG        Ductal
#> ATCATGGAGGAATGGA ATCATGGAGGAATGGA     Endocrine
#> ATCATGGGTATTCGTG ATCATGGGTATTCGTG     Endocrine
#> ATCATGGGTCCGCTGA ATCATGGGTCCGCTGA  Ngn3-high-EP
#> ATCATGGTCCAGAGGA ATCATGGTCCAGAGGA        Ductal
#> ATCCACCAGAGCCTAG ATCCACCAGAGCCTAG     Endocrine
#> ATCCACCCAGCTCGCA ATCCACCCAGCTCGCA     Endocrine
#> ATCCACCGTACCATCA ATCCACCGTACCATCA        Ductal
#> ATCCGAAGTACACCGC ATCCGAAGTACACCGC Pre-endocrine
#> ATCCGAAGTGACTCAT ATCCGAAGTGACTCAT        Ductal
#> ATCTGCCCAATCCGAT ATCTGCCCAATCCGAT     Endocrine
#> ATCTGCCCATGTTGAC ATCTGCCCATGTTGAC     Endocrine
#> ATGAGGGTCTTGACGA ATGAGGGTCTTGACGA Pre-endocrine
#> ATGTGTGCACAAGTAA ATGTGTGCACAAGTAA  Ngn3-high-EP
#> ATGTGTGTCAAAGACA ATGTGTGTCAAAGACA  Ngn3-high-EP
#> ATTACTCAGTTGCAGG ATTACTCAGTTGCAGG        Ductal
#> ATTACTCTCAGGCGAA ATTACTCTCAGGCGAA        Ductal
#> ATTACTCTCTGCCAGG ATTACTCTCTGCCAGG     Endocrine
#> ATTATCCAGAAACCTA ATTATCCAGAAACCTA  Ngn3-high-EP
#> ATTATCCAGACCCACC ATTATCCAGACCCACC  Ngn3-high-EP
#> ATTATCCAGTGAACAT ATTATCCAGTGAACAT        Ductal
#> ATTGGACAGTAATCCC ATTGGACAGTAATCCC   Ngn3-low-EP
#> ATTGGTGTCCAGTATG ATTGGTGTCCAGTATG        Ductal
#> ATTTCTGGTAGTGAAT ATTTCTGGTAGTGAAT   Ngn3-low-EP
#> CAACCAAAGCGTTCCG CAACCAAAGCGTTCCG Pre-endocrine
#> CAACCAACAACCGCCA CAACCAACAACCGCCA     Endocrine
#> CAACCAACACCTCGTT CAACCAACACCTCGTT  Ngn3-high-EP
#> CAACCAATCGGGAGTA CAACCAATCGGGAGTA        Ductal
#> CAAGAAAAGAGTACCG CAAGAAAAGAGTACCG  Ngn3-high-EP
#> CAAGAAATCGTACCGG CAAGAAATCGTACCGG        Ductal
#> CAAGGCCAGCTGTTCA CAAGGCCAGCTGTTCA        Ductal
#> CAAGGCCAGTGTGGCA CAAGGCCAGTGTGGCA        Ductal
#> CAAGGCCCACATTTCT CAAGGCCCACATTTCT  Ngn3-high-EP
#> CAAGGCCTCAGTGCAT CAAGGCCTCAGTGCAT     Endocrine
#> CAAGGCCTCTCAACTT CAAGGCCTCTCAACTT Pre-endocrine
#> CAAGGCCTCTTACCTA CAAGGCCTCTTACCTA     Endocrine
#> CAAGTTGGTGTGCCTG CAAGTTGGTGTGCCTG Pre-endocrine
#> CAAGTTGTCTAACTGG CAAGTTGTCTAACTGG Pre-endocrine
#> CACAAACAGTAGCGGT CACAAACAGTAGCGGT  Ngn3-high-EP
#> CACAAACCACGAAAGC CACAAACCACGAAAGC     Endocrine
#> CACACAACAGCCAGAA CACACAACAGCCAGAA        Ductal
#> CACACCTGTACATGTC CACACCTGTACATGTC     Endocrine
#> CACACCTGTTATCCGA CACACCTGTTATCCGA Pre-endocrine
#> CACACTCAGATCCCAT CACACTCAGATCCCAT        Ductal
#> CACACTCTCATGTGGT CACACTCTCATGTGGT   Ngn3-low-EP
#> CACAGGCCAAGGCTCC CACAGGCCAAGGCTCC Pre-endocrine
#> CACAGGCCACGTCAGC CACAGGCCACGTCAGC     Endocrine
#> CACAGTAGTGCACTTA CACAGTAGTGCACTTA     Endocrine
#> CACAGTAGTTCCTCCA CACAGTAGTTCCTCCA        Ductal
#> CACAGTATCCTCCTAG CACAGTATCCTCCTAG        Ductal
#> CACATAGAGCGTGTCC CACATAGAGCGTGTCC        Ductal
#> CACATTTGTTTCGCTC CACATTTGTTTCGCTC        Ductal
#> CACATTTTCGAGGTAG CACATTTTCGAGGTAG     Endocrine
#> CACATTTTCGCAGGCT CACATTTTCGCAGGCT        Ductal
#> CACCACTAGCGATCCC CACCACTAGCGATCCC     Endocrine
#> CACCACTGTGTGTGCC CACCACTGTGTGTGCC Pre-endocrine
#> CACCAGGCATAAAGGT CACCAGGCATAAAGGT Pre-endocrine
#> CACCTTGAGAGTAATC CACCTTGAGAGTAATC        Ductal
#> CACTCCACATCGTCGG CACTCCACATCGTCGG     Endocrine
#> CACTCCATCAACACAC CACTCCATCAACACAC     Endocrine
#> CAGAATCCATTGGGCC CAGAATCCATTGGGCC     Endocrine
#> CAGAATCGTCATTAGC CAGAATCGTCATTAGC  Ngn3-high-EP
#> CAGAATCGTGTAAGTA CAGAATCGTGTAAGTA   Ngn3-low-EP
#> CAGAGAGTCGGCCGAT CAGAGAGTCGGCCGAT     Endocrine
#> CAGATCAAGCTGTTCA CAGATCAAGCTGTTCA     Endocrine
#> CAGCAGCAGACAAAGG CAGCAGCAGACAAAGG        Ductal
#> CAGCAGCCACACTGCG CAGCAGCCACACTGCG        Ductal
#> CAGCAGCGTTCACGGC CAGCAGCGTTCACGGC        Ductal
#> CAGCCGAAGCGATATA CAGCCGAAGCGATATA        Ductal
#> CAGCCGAAGTAGGTGC CAGCCGAAGTAGGTGC        Ductal
#> CAGCCGATCCTATTCA CAGCCGATCCTATTCA  Ngn3-high-EP
#> CAGCCGATCGTTTATC CAGCCGATCGTTTATC  Ngn3-high-EP
#> CAGCGACCACAGGAGT CAGCGACCACAGGAGT        Ductal
#> CAGCTAAAGTCCATAC CAGCTAAAGTCCATAC        Ductal
#> CAGCTAACATGCCTAA CAGCTAACATGCCTAA Pre-endocrine
#> CAGCTAAGTACCGAGA CAGCTAAGTACCGAGA  Ngn3-high-EP
#> CAGCTGGCAAGTTGTC CAGCTGGCAAGTTGTC Pre-endocrine
#> CAGCTGGGTCTAACGT CAGCTGGGTCTAACGT Pre-endocrine
#> CAGCTGGGTTCTCATT CAGCTGGGTTCTCATT     Endocrine
#> CAGGTGCAGCCAGGAT CAGGTGCAGCCAGGAT     Endocrine
#> CAGGTGCCATCAGTCA CAGGTGCCATCAGTCA Pre-endocrine
#> CAGTCCTAGGTGGGTT CAGTCCTAGGTGGGTT     Endocrine
#> CAGTCCTCAGGGCATA CAGTCCTCAGGGCATA     Endocrine
#> CATATGGCATGTTGAC CATATGGCATGTTGAC        Ductal
#> CATATGGGTTACTGAC CATATGGGTTACTGAC     Endocrine
#> CATATGGTCACAGTAC CATATGGTCACAGTAC Pre-endocrine
#> CATATTCTCCTGTAGA CATATTCTCCTGTAGA     Endocrine
#> CATCAGACATGCATGT CATCAGACATGCATGT        Ductal
#> CATCAGAGTCTCTTTA CATCAGAGTCTCTTTA Pre-endocrine
#> CATCAGATCATCGCTC CATCAGATCATCGCTC Pre-endocrine
#> CATCGAAGTACGAAAT CATCGAAGTACGAAAT     Endocrine
#> CATCGAAGTCACACGC CATCGAAGTCACACGC     Endocrine
#> CATCGGGCACGTTGGC CATCGGGCACGTTGGC     Endocrine
#> CATCGGGTCTTCGGTC CATCGGGTCTTCGGTC  Ngn3-high-EP
#> CATGACACAACAACCT CATGACACAACAACCT   Ngn3-low-EP
#> CATGACACATCGATTG CATGACACATCGATTG  Ngn3-high-EP
#> CATGACAGTAGCTTGT CATGACAGTAGCTTGT   Ngn3-low-EP
#> CATGACATCATGCATG CATGACATCATGCATG     Endocrine
#> CATGCCTCACCCATTC CATGCCTCACCCATTC     Endocrine
#> CATGGCGAGAGTCTGG CATGGCGAGAGTCTGG  Ngn3-high-EP
#> CATTATCGTCATATCG CATTATCGTCATATCG Pre-endocrine
#> CCAATCCAGAGTAAGG CCAATCCAGAGTAAGG        Ductal
#> CCACCTAAGACTTGAA CCACCTAAGACTTGAA     Endocrine
#> CCACCTACAGCTCGAC CCACCTACAGCTCGAC     Endocrine
#> CCACCTATCACCAGGC CCACCTATCACCAGGC        Ductal
#> CCACCTATCTAAGCCA CCACCTATCTAAGCCA     Endocrine
#> CCACGGAAGATCCTGT CCACGGAAGATCCTGT     Endocrine
#> CCACGGAAGCAATCTC CCACGGAAGCAATCTC     Endocrine
#> CCACGGAAGGGTGTTG CCACGGAAGGGTGTTG     Endocrine
#> CCACGGAAGTCTCCTC CCACGGAAGTCTCCTC Pre-endocrine
#> CCACGGAGTCAACATC CCACGGAGTCAACATC  Ngn3-high-EP
#> CCACGGAGTCTAGTCA CCACGGAGTCTAGTCA     Endocrine
#> CCACGGAGTTACGACT CCACGGAGTTACGACT  Ngn3-high-EP
#> CCACTACAGAGCTGGT CCACTACAGAGCTGGT Pre-endocrine
#> CCACTACAGAGTACCG CCACTACAGAGTACCG   Ngn3-low-EP
#> CCACTACCAACGCACC CCACTACCAACGCACC     Endocrine
#> CCAGCGACAGACGTAG CCAGCGACAGACGTAG Pre-endocrine
#> CCATGTCGTCGGCTCA CCATGTCGTCGGCTCA  Ngn3-high-EP
#> CCATGTCTCCGCATAA CCATGTCTCCGCATAA  Ngn3-high-EP
#> CCATTCGCATGCCTAA CCATTCGCATGCCTAA        Ductal
#> CCATTCGGTAGGGACT CCATTCGGTAGGGACT        Ductal
#> CCCAATCCAACTGGCC CCCAATCCAACTGGCC     Endocrine
#> CCCAGTTAGCATCATC CCCAGTTAGCATCATC     Endocrine
#> CCCAGTTGTCGTGGCT CCCAGTTGTCGTGGCT     Endocrine
#> CCCAGTTGTGCGCTTG CCCAGTTGTGCGCTTG     Endocrine
#> CCCAGTTTCAGCACAT CCCAGTTTCAGCACAT     Endocrine
#> CCCATACAGACTTTCG CCCATACAGACTTTCG     Endocrine
#> CCCATACCACATCCAA CCCATACCACATCCAA        Ductal
#> CCCATACCATGCAACT CCCATACCATGCAACT     Endocrine
#> CCCATACTCGTGGACC CCCATACTCGTGGACC Pre-endocrine
#> CCGGGATAGATCTGAA CCGGGATAGATCTGAA  Ngn3-high-EP
#> CCGGGATTCGACAGCC CCGGGATTCGACAGCC     Endocrine
#> CCGGTAGTCGGCTTGG CCGGTAGTCGGCTTGG     Endocrine
#> CCGTACTAGGAGTACC CCGTACTAGGAGTACC  Ngn3-high-EP
#> CCGTACTAGTCCGTAT CCGTACTAGTCCGTAT  Ngn3-high-EP
#> CCGTACTTCAATAAGG CCGTACTTCAATAAGG   Ngn3-low-EP
#> CCGTGGACATAGAAAC CCGTGGACATAGAAAC     Endocrine
#> CCGTGGATCCAAGCCG CCGTGGATCCAAGCCG        Ductal
#> CCGTGGATCTGTCTCG CCGTGGATCTGTCTCG     Endocrine
#> CCGTGGATCTTAGAGC CCGTGGATCTTAGAGC  Ngn3-high-EP
#> CCGTTCAAGCTAAACA CCGTTCAAGCTAAACA     Endocrine
#> CCGTTCAAGGACCACA CCGTTCAAGGACCACA  Ngn3-high-EP
#> CCGTTCACACATGACT CCGTTCACACATGACT   Ngn3-low-EP
#> CCTACACAGATCCGAG CCTACACAGATCCGAG   Ngn3-low-EP
#> CCTACACAGTACGTTC CCTACACAGTACGTTC     Endocrine
#> CCTACACTCCTTTACA CCTACACTCCTTTACA        Ductal
#> CCTACACTCTTTACAC CCTACACTCTTTACAC     Endocrine
#> CCTACCACATCGATTG CCTACCACATCGATTG  Ngn3-high-EP
#> CCTACCAGTTGCTCCT CCTACCAGTTGCTCCT Pre-endocrine
#> CCTACCATCTGCCCTA CCTACCATCTGCCCTA     Endocrine
#> CCTAGCTCAGACTCGC CCTAGCTCAGACTCGC        Ductal
#> CCTAGCTCATACTACG CCTAGCTCATACTACG        Ductal
#> CCTAGCTGTGGCCCTA CCTAGCTGTGGCCCTA     Endocrine
#> CCTAGCTTCGATGAGG CCTAGCTTCGATGAGG        Ductal
#> CCTATTACAGACAAGC CCTATTACAGACAAGC     Endocrine
#> CCTATTATCATCGCTC CCTATTATCATCGCTC  Ngn3-high-EP
#> CCTCAGTAGTGCGATG CCTCAGTAGTGCGATG Pre-endocrine
#> CCTCAGTCAGACACTT CCTCAGTCAGACACTT     Endocrine
#> CCTCAGTGTTACCAGT CCTCAGTGTTACCAGT  Ngn3-high-EP
#> CCTCTGAGTATAAACG CCTCTGAGTATAAACG        Ductal
#> CCTTACGAGATCACGG CCTTACGAGATCACGG        Ductal
#> CCTTACGCACAACGCC CCTTACGCACAACGCC Pre-endocrine
#> CCTTCCCAGGCAGGTT CCTTCCCAGGCAGGTT        Ductal
#> CCTTCCCCAAAGTGCG CCTTCCCCAAAGTGCG        Ductal
#> CCTTCCCTCGTCGTTC CCTTCCCTCGTCGTTC Pre-endocrine
#> CCTTCGAAGATAGCAT CCTTCGAAGATAGCAT     Endocrine
#> CCTTCGACAGCTGTTA CCTTCGACAGCTGTTA   Ngn3-low-EP
#> CCTTCGATCACAGGCC CCTTCGATCACAGGCC     Endocrine
#> CGAACATAGCCAGTAG CGAACATAGCCAGTAG        Ductal
#> CGAACATCAGACGTAG CGAACATCAGACGTAG        Ductal
#> CGAATGTAGTTCCACA CGAATGTAGTTCCACA        Ductal
#> CGAATGTGTCTGGAGA CGAATGTGTCTGGAGA Pre-endocrine
#> CGAATGTTCACCGGGT CGAATGTTCACCGGGT Pre-endocrine
#> CGAATGTTCTTCATGT CGAATGTTCTTCATGT     Endocrine
#> CGACCTTAGCGCTTAT CGACCTTAGCGCTTAT   Ngn3-low-EP
#> CGACCTTAGGCTAGAC CGACCTTAGGCTAGAC     Endocrine
#> CGACTTCCAGCCTATA CGACTTCCAGCCTATA        Ductal
#> CGACTTCCAGCTGCAC CGACTTCCAGCTGCAC Pre-endocrine
#> CGACTTCTCACGCGGT CGACTTCTCACGCGGT     Endocrine
#> CGAGAAGAGGGTTCCC CGAGAAGAGGGTTCCC     Endocrine
#> CGAGAAGCACGCATCG CGAGAAGCACGCATCG  Ngn3-high-EP
#> CGAGAAGTCGTTACAG CGAGAAGTCGTTACAG     Endocrine
#> CGAGCACAGCTGAAAT CGAGCACAGCTGAAAT        Ductal
#> CGAGCACAGGCAGGTT CGAGCACAGGCAGGTT Pre-endocrine
#> CGAGCACGTAGTAGTA CGAGCACGTAGTAGTA Pre-endocrine
#> CGAGCACTCTACCTGC CGAGCACTCTACCTGC        Ductal
#> CGAGCACTCTTCGAGA CGAGCACTCTTCGAGA   Ngn3-low-EP
#> CGATCGGAGCTGCAAG CGATCGGAGCTGCAAG Pre-endocrine
#> CGATCGGCACGCCAGT CGATCGGCACGCCAGT  Ngn3-high-EP
#> CGATGGCGTTACGGAG CGATGGCGTTACGGAG        Ductal
#> CGATGGCTCAGTGTTG CGATGGCTCAGTGTTG     Endocrine
#> CGATGGCTCTGTGCAA CGATGGCTCTGTGCAA        Ductal
#> CGATGTAAGTTTAGGA CGATGTAAGTTTAGGA     Endocrine
#> CGATGTAGTACTCTCC CGATGTAGTACTCTCC  Ngn3-high-EP
#> CGATTGAAGTCAAGGC CGATTGAAGTCAAGGC Pre-endocrine
#> CGCCAAGCAAAGTCAA CGCCAAGCAAAGTCAA  Ngn3-high-EP
#> CGCCAAGCACCGGAAA CGCCAAGCACCGGAAA        Ductal
#> CGCCAAGTCTAAGCCA CGCCAAGTCTAAGCCA     Endocrine
#> CGCGGTAAGAGCTGGT CGCGGTAAGAGCTGGT     Endocrine
#> CGCGGTAAGCTGCAAG CGCGGTAAGCTGCAAG     Endocrine
#> CGCGTTTCAGTCTTCC CGCGTTTCAGTCTTCC     Endocrine
#> CGCTGGAGTCCATCCT CGCTGGAGTCCATCCT        Ductal
#> CGCTTCATCTCTGTCG CGCTTCATCTCTGTCG     Endocrine
#> CGGACACAGTGTCTCA CGGACACAGTGTCTCA        Ductal
#> CGGACGTAGACACGAC CGGACGTAGACACGAC     Endocrine
#> CGGACTGAGGTAGCTG CGGACTGAGGTAGCTG        Ductal
#> CGGACTGTCTTGAGAC CGGACTGTCTTGAGAC     Endocrine
#> CGGAGCTAGATAGTCA CGGAGCTAGATAGTCA     Endocrine
#> CGGAGCTCATTGGGCC CGGAGCTCATTGGGCC        Ductal
#> CGGAGTCAGTTTAGGA CGGAGTCAGTTTAGGA     Endocrine
#> CGGCTAGGTACTCGCG CGGCTAGGTACTCGCG  Ngn3-high-EP
#> CGGGTCAAGGCGATAC CGGGTCAAGGCGATAC     Endocrine
#> CGGGTCAAGGCTCAGA CGGGTCAAGGCTCAGA        Ductal
#> CGGTTAAAGAGCTGCA CGGTTAAAGAGCTGCA        Ductal
#> CGGTTAAGTAAACACA CGGTTAAGTAAACACA   Ngn3-low-EP
#> CGGTTAAGTCTAGCCG CGGTTAAGTCTAGCCG  Ngn3-high-EP
#> CGGTTAATCACCGGGT CGGTTAATCACCGGGT Pre-endocrine
#> CGGTTAATCGTCTGAA CGGTTAATCGTCTGAA        Ductal
#> CGTAGCGTCGGAAATA CGTAGCGTCGGAAATA Pre-endocrine
#> CGTAGGCAGCGTAGTG CGTAGGCAGCGTAGTG        Ductal
#> CGTCACTAGGGTGTGT CGTCACTAGGGTGTGT        Ductal
#> CGTCACTCACGAAATA CGTCACTCACGAAATA   Ngn3-low-EP
#> CGTCACTCATAGTAAG CGTCACTCATAGTAAG   Ngn3-low-EP
#> CGTCACTTCACTTATC CGTCACTTCACTTATC Pre-endocrine
#> CGTCACTTCTAACTCT CGTCACTTCTAACTCT     Endocrine
#> CGTCAGGAGCCTATGT CGTCAGGAGCCTATGT   Ngn3-low-EP
#> CGTCAGGCATGGGAAC CGTCAGGCATGGGAAC   Ngn3-low-EP
#> CGTCAGGGTAGGCATG CGTCAGGGTAGGCATG  Ngn3-high-EP
#> CGTCAGGTCCGCAAGC CGTCAGGTCCGCAAGC     Endocrine
#> CGTCAGGTCCTGCCAT CGTCAGGTCCTGCCAT        Ductal
#> CGTCCATGTCTAACGT CGTCCATGTCTAACGT     Endocrine
#> CGTCCATTCGCGCCAA CGTCCATTCGCGCCAA  Ngn3-high-EP
#> CGTCTACAGATCTGCT CGTCTACAGATCTGCT        Ductal
#> CGTCTACAGGGAGTAA CGTCTACAGGGAGTAA     Endocrine
#> CGTGAGCTCAGCGATT CGTGAGCTCAGCGATT  Ngn3-high-EP
#> CGTGAGCTCTTCTGGC CGTGAGCTCTTCTGGC     Endocrine
#> CGTGTAAGTCTTGATG CGTGTAAGTCTTGATG   Ngn3-low-EP
#> CGTGTAATCATTATCC CGTGTAATCATTATCC  Ngn3-high-EP
#> CGTGTAATCCATGCTC CGTGTAATCCATGCTC        Ductal
#> CGTGTCTCAGAAGCAC CGTGTCTCAGAAGCAC     Endocrine
#> CGTGTCTGTAGCGTCC CGTGTCTGTAGCGTCC     Endocrine
#> CGTTAGAAGTATCTCG CGTTAGAAGTATCTCG        Ductal
#> CGTTAGAGTGCAACGA CGTTAGAGTGCAACGA        Ductal
#> CGTTCTGAGGACGAAA CGTTCTGAGGACGAAA     Endocrine
#> CGTTCTGTCACAATGC CGTTCTGTCACAATGC  Ngn3-high-EP
#> CGTTCTGTCGATAGAA CGTTCTGTCGATAGAA     Endocrine
#> CGTTGGGCAGGCGATA CGTTGGGCAGGCGATA Pre-endocrine
#> CTAACTTAGAGGTACC CTAACTTAGAGGTACC     Endocrine
#> CTAACTTAGATCACGG CTAACTTAGATCACGG     Endocrine
#> CTAACTTCATCTGGTA CTAACTTCATCTGGTA     Endocrine
#> CTAACTTCATTGGGCC CTAACTTCATTGGGCC        Ductal
#> CTAAGACAGCACGCCT CTAAGACAGCACGCCT  Ngn3-high-EP
#> CTAAGACAGCCACGCT CTAAGACAGCCACGCT   Ngn3-low-EP
#> CTAAGACGTATCAGTC CTAAGACGTATCAGTC     Endocrine
#> CTAAGACTCTGCGGCA CTAAGACTCTGCGGCA     Endocrine
#> CTAATGGCATGGTTGT CTAATGGCATGGTTGT Pre-endocrine
#> CTACACCCATCAGTCA CTACACCCATCAGTCA     Endocrine
#> CTACACCGTCGAATCT CTACACCGTCGAATCT        Ductal
#> CTACACCGTCGCCATG CTACACCGTCGCCATG        Ductal
#> CTACATTCACCGTTGG CTACATTCACCGTTGG Pre-endocrine
#> CTACATTGTTACTGAC CTACATTGTTACTGAC Pre-endocrine
#> CTACCCAGTGCGCTTG CTACCCAGTGCGCTTG        Ductal
#> CTACGTCAGCTAGGCA CTACGTCAGCTAGGCA Pre-endocrine
#> CTAGAGTCACTGTTAG CTAGAGTCACTGTTAG        Ductal
#> CTAGCCTGTCTCTTAT CTAGCCTGTCTCTTAT        Ductal
#> CTAGCCTGTTCGGGCT CTAGCCTGTTCGGGCT        Ductal
#> CTAGCCTTCAGCGATT CTAGCCTTCAGCGATT        Ductal
#> CTAGTGATCAAAGACA CTAGTGATCAAAGACA     Endocrine
#> CTAGTGATCCCAGGTG CTAGTGATCCCAGGTG     Endocrine
#> CTCACACGTCACACGC CTCACACGTCACACGC  Ngn3-high-EP
#> CTCAGAACACTAGTAC CTCAGAACACTAGTAC  Ngn3-high-EP
#> CTCAGAACATAGGATA CTCAGAACATAGGATA     Endocrine
#> CTCAGAAGTCCTCTTG CTCAGAAGTCCTCTTG        Ductal
#> CTCAGAATCAGGTTCA CTCAGAATCAGGTTCA   Ngn3-low-EP
#> CTCATTACAAGCGCTC CTCATTACAAGCGCTC        Ductal
#> CTCCTAGCACAACGTT CTCCTAGCACAACGTT Pre-endocrine
#> CTCGAAAGTAAGAGGA CTCGAAAGTAAGAGGA  Ngn3-high-EP
#> CTCGAAAGTGGTGTAG CTCGAAAGTGGTGTAG     Endocrine
#> CTCGAAATCCTGCCAT CTCGAAATCCTGCCAT     Endocrine
#> CTCGAGGCAAGTCTGT CTCGAGGCAAGTCTGT     Endocrine
#> CTCGAGGGTAAGTAGT CTCGAGGGTAAGTAGT     Endocrine
#> CTCGAGGTCTGTTGAG CTCGAGGTCTGTTGAG  Ngn3-high-EP
#> CTCGGAGGTCATTAGC CTCGGAGGTCATTAGC Pre-endocrine
#> CTCGGAGGTGAAGGCT CTCGGAGGTGAAGGCT Pre-endocrine
#> CTCGTACCAATGGATA CTCGTACCAATGGATA        Ductal
#> CTCGTACTCTTTAGTC CTCGTACTCTTTAGTC     Endocrine
#> CTCGTCAAGAACAATC CTCGTCAAGAACAATC     Endocrine
#> CTCGTCACAACTGCTA CTCGTCACAACTGCTA        Ductal
#> CTCGTCATCGGTCTAA CTCGTCATCGGTCTAA        Ductal
#> CTCTAATAGTTATCGC CTCTAATAGTTATCGC     Endocrine
#> CTCTGGTAGCAATCTC CTCTGGTAGCAATCTC  Ngn3-high-EP
#> CTCTGGTAGTCCCACG CTCTGGTAGTCCCACG        Ductal
#> CTCTGGTCAACACCTA CTCTGGTCAACACCTA        Ductal
#> CTCTGGTCAAGACACG CTCTGGTCAAGACACG     Endocrine
#> CTCTGGTCAAGTTGTC CTCTGGTCAAGTTGTC Pre-endocrine
#> CTCTGGTCAGTTCATG CTCTGGTCAGTTCATG   Ngn3-low-EP
#> CTGAAACAGACTAGGC CTGAAACAGACTAGGC        Ductal
#> CTGAAACGTAGCGCAA CTGAAACGTAGCGCAA     Endocrine
#> CTGAAACGTATGGTTC CTGAAACGTATGGTTC     Endocrine
#> CTGAAACTCGATAGAA CTGAAACTCGATAGAA  Ngn3-high-EP
#> CTGAAACTCGCCGTGA CTGAAACTCGCCGTGA        Ductal
#> CTGAAACTCTGTTTGT CTGAAACTCTGTTTGT  Ngn3-high-EP
#> CTGAAGTGTTTGGGCC CTGAAGTGTTTGGGCC     Endocrine
#> CTGAAGTTCTGCGGCA CTGAAGTTCTGCGGCA Pre-endocrine
#> CTGATCCTCAGTTGAC CTGATCCTCAGTTGAC        Ductal
#> CTGCCTAGTCTCCATC CTGCCTAGTCTCCATC        Ductal
#> CTGCGGACAGACTCGC CTGCGGACAGACTCGC  Ngn3-high-EP
#> CTGCGGACATTAGCCA CTGCGGACATTAGCCA Pre-endocrine
#> CTGCGGATCAGCATGT CTGCGGATCAGCATGT        Ductal
#> CTGCTGTAGACTGGGT CTGCTGTAGACTGGGT Pre-endocrine
#> CTGCTGTCAAAGCAAT CTGCTGTCAAAGCAAT     Endocrine
#> CTGGTCTAGGATTCGG CTGGTCTAGGATTCGG Pre-endocrine
#> CTGGTCTAGGTGATTA CTGGTCTAGGTGATTA     Endocrine
#> CTGGTCTCAGGAATGC CTGGTCTCAGGAATGC        Ductal
#> CTGGTCTTCGCATGGC CTGGTCTTCGCATGGC  Ngn3-high-EP
#> CTGTGCTCATTACCTT CTGTGCTCATTACCTT  Ngn3-high-EP
#> CTTAACTCAAGCGTAG CTTAACTCAAGCGTAG        Ductal
#> CTTAACTTCAGCTTAG CTTAACTTCAGCTTAG Pre-endocrine
#> CTTAGGACACAGGTTT CTTAGGACACAGGTTT        Ductal
#> CTTAGGAGTCCGAATT CTTAGGAGTCCGAATT        Ductal
#> CTTAGGATCAACGGGA CTTAGGATCAACGGGA     Endocrine
#> CTTAGGATCACTCTTA CTTAGGATCACTCTTA  Ngn3-high-EP
#> CTTCTCTAGGCAGGTT CTTCTCTAGGCAGGTT        Ductal
#> CTTCTCTAGTCCGTAT CTTCTCTAGTCCGTAT Pre-endocrine
#> CTTCTCTCAGCATACT CTTCTCTCAGCATACT     Endocrine
#> CTTCTCTGTCAGAGGT CTTCTCTGTCAGAGGT     Endocrine
#> CTTGGCTAGACAGACC CTTGGCTAGACAGACC        Ductal
#> CTTGGCTAGGACACCA CTTGGCTAGGACACCA        Ductal
#> CTTGGCTCAAAGGAAG CTTGGCTCAAAGGAAG Pre-endocrine
#> CTTGGCTCAGCCACCA CTTGGCTCAGCCACCA  Ngn3-high-EP
#> CTTGGCTCATCCCACT CTTGGCTCATCCCACT     Endocrine
#> CTTGGCTGTTAGAACA CTTGGCTGTTAGAACA     Endocrine
#> CTTTGCGAGACCACGA CTTTGCGAGACCACGA Pre-endocrine
#> CTTTGCGAGGAATGGA CTTTGCGAGGAATGGA   Ngn3-low-EP
#> CTTTGCGTCCACGTGG CTTTGCGTCCACGTGG     Endocrine
#> GAAACTCAGAAACCTA GAAACTCAGAAACCTA     Endocrine
#> GAAATGAAGCTCCTCT GAAATGAAGCTCCTCT  Ngn3-high-EP
#> GAAATGACAACTGGCC GAAATGACAACTGGCC   Ngn3-low-EP
#> GAAATGACACATGACT GAAATGACACATGACT        Ductal
#> GAAATGAGTCACCCAG GAAATGAGTCACCCAG  Ngn3-high-EP
#> GAAATGAGTCGGATCC GAAATGAGTCGGATCC        Ductal
#> GAACATCGTAATCGTC GAACATCGTAATCGTC        Ductal
#> GAACCTAAGTAGATGT GAACCTAAGTAGATGT     Endocrine
#> GAACCTATCACTTATC GAACCTATCACTTATC     Endocrine
#> GAACGGAAGTCAAGCG GAACGGAAGTCAAGCG     Endocrine
#> GAACGGACAAGGACAC GAACGGACAAGGACAC     Endocrine
#> GAAGCAGGTCGCGAAA GAAGCAGGTCGCGAAA Pre-endocrine
#> GAAGCAGGTCTAGAGG GAAGCAGGTCTAGAGG     Endocrine
#> GAAGCAGTCAAGGCTT GAAGCAGTCAAGGCTT        Ductal
#> GAATGAAAGAATGTGT GAATGAAAGAATGTGT  Ngn3-high-EP
#> GAATGAACAATCGAAA GAATGAACAATCGAAA        Ductal
#> GAATGAACAGCCTTGG GAATGAACAGCCTTGG        Ductal
#> GAATGAATCATCGGAT GAATGAATCATCGGAT     Endocrine
#> GACACGCCAAAGGAAG GACACGCCAAAGGAAG        Ductal
#> GACCAATAGAATGTGT GACCAATAGAATGTGT     Endocrine
#> GACCAATCAGACGCCT GACCAATCAGACGCCT Pre-endocrine
#> GACCAATGTTATCCGA GACCAATGTTATCCGA     Endocrine
#> GACCAATGTTGGACCC GACCAATGTTGGACCC     Endocrine
#> GACCAATTCAACGGCC GACCAATTCAACGGCC  Ngn3-high-EP
#> GACCTGGGTTCGTGAT GACCTGGGTTCGTGAT     Endocrine
#> GACGCGTCAGTCGTGC GACGCGTCAGTCGTGC        Ductal
#> GACGCGTGTCGGCTCA GACGCGTGTCGGCTCA     Endocrine
#> GACGGCTAGGTGATAT GACGGCTAGGTGATAT        Ductal
#> GACGGCTTCAACTCTT GACGGCTTCAACTCTT Pre-endocrine
#> GACGTGCGTCACCTAA GACGTGCGTCACCTAA Pre-endocrine
#> GACGTGCTCCGGCACA GACGTGCTCCGGCACA     Endocrine
#> GACGTTAAGACGCAAC GACGTTAAGACGCAAC        Ductal
#> GACGTTAAGACGCTTT GACGTTAAGACGCTTT  Ngn3-high-EP
#> GACGTTACATCTCGCT GACGTTACATCTCGCT     Endocrine
#> GACGTTAGTGTGAATA GACGTTAGTGTGAATA Pre-endocrine
#> GACTAACGTCATCCCT GACTAACGTCATCCCT  Ngn3-high-EP
#> GACTAACTCAGTCCCT GACTAACTCAGTCCCT        Ductal
#> GACTACAGTTCGTGAT GACTACAGTTCGTGAT        Ductal
#> GACTGCGAGAATCTCC GACTGCGAGAATCTCC  Ngn3-high-EP
#> GAGCAGAAGCGTGTCC GAGCAGAAGCGTGTCC        Ductal
#> GAGCAGAGTTTGCATG GAGCAGAGTTTGCATG     Endocrine
#> GAGCAGATCAACTCTT GAGCAGATCAACTCTT Pre-endocrine
#> GAGGTGAGTCCGCTGA GAGGTGAGTCCGCTGA Pre-endocrine
#> GAGGTGAGTGACAAAT GAGGTGAGTGACAAAT        Ductal
#> GAGTCCGAGCGATGAC GAGTCCGAGCGATGAC  Ngn3-high-EP
#> GAGTCCGAGTTAAGTG GAGTCCGAGTTAAGTG        Ductal
#> GAGTCCGCAATTGCTG GAGTCCGCAATTGCTG        Ductal
#> GATCAGTAGGTGATAT GATCAGTAGGTGATAT     Endocrine
#> GATCGATAGAAAGTGG GATCGATAGAAAGTGG Pre-endocrine
#> GATCGATAGGATGGTC GATCGATAGGATGGTC     Endocrine
#> GATCGATGTAGCGATG GATCGATGTAGCGATG     Endocrine
#> GATCGATGTTGTTTGG GATCGATGTTGTTTGG     Endocrine
#> GATCGCGCACCAGGCT GATCGCGCACCAGGCT Pre-endocrine
#> GATCGTAAGTAGGTGC GATCGTAAGTAGGTGC Pre-endocrine
#> GATCGTAGTCCTAGCG GATCGTAGTCCTAGCG        Ductal
#> GATCTAGAGCTAGCCC GATCTAGAGCTAGCCC     Endocrine
#> GATCTAGGTGCCTTGG GATCTAGGTGCCTTGG        Ductal
#> GATGAAAAGTTGTAGA GATGAAAAGTTGTAGA   Ngn3-low-EP
#> GATGAAACAGGCTGAA GATGAAACAGGCTGAA     Endocrine
#> GATGAAACATGGTTGT GATGAAACATGGTTGT        Ductal
#> GATGAGGAGTGGACGT GATGAGGAGTGGACGT  Ngn3-high-EP
#> GATGAGGTCTGGGCCA GATGAGGTCTGGGCCA        Ductal
#> GATGCTAGTAGAAGGA GATGCTAGTAGAAGGA        Ductal
#> GATGCTAGTGTTAAGA GATGCTAGTGTTAAGA Pre-endocrine
#> GATTCAGAGCGATGAC GATTCAGAGCGATGAC Pre-endocrine
#> GATTCAGAGTACGTTC GATTCAGAGTACGTTC     Endocrine
#> GATTCAGTCGCCAGCA GATTCAGTCGCCAGCA Pre-endocrine
#> GATTCAGTCGTCCAGG GATTCAGTCGTCCAGG     Endocrine
#> GCAAACTCAGACAAAT GCAAACTCAGACAAAT     Endocrine
#> GCAATCACAGCTGCTG GCAATCACAGCTGCTG     Endocrine
#> GCAATCATCCAACCAA GCAATCATCCAACCAA        Ductal
#> GCACTCTCAGCGTCCA GCACTCTCAGCGTCCA     Endocrine
#> GCAGCCACAGCGTTCG GCAGCCACAGCGTTCG  Ngn3-high-EP
#> GCAGTTACATTTCACT GCAGTTACATTTCACT Pre-endocrine
#> GCAGTTATCTTGAGAC GCAGTTATCTTGAGAC        Ductal
#> GCATGATAGCCTTGAT GCATGATAGCCTTGAT  Ngn3-high-EP
#> GCATGATCAAGCGAGT GCATGATCAAGCGAGT     Endocrine
#> GCATGATGTCACTGGC GCATGATGTCACTGGC     Endocrine
#> GCATGATGTTTAGGAA GCATGATGTTTAGGAA     Endocrine
#> GCATGATTCAAACGGG GCATGATTCAAACGGG        Ductal
#> GCATGCGAGGAACTGC GCATGCGAGGAACTGC Pre-endocrine
#> GCATGCGCAGCTCCGA GCATGCGCAGCTCCGA     Endocrine
#> GCATGTAAGAATCTCC GCATGTAAGAATCTCC     Endocrine
#> GCATGTAAGCGTGTCC GCATGTAAGCGTGTCC     Endocrine
#> GCATGTAGTTGCGCAC GCATGTAGTTGCGCAC     Endocrine
#> GCATGTATCGTGGACC GCATGTATCGTGGACC     Endocrine
#> GCCTCTAAGCTAGTCT GCCTCTAAGCTAGTCT     Endocrine
#> GCCTCTAAGTCCGGTC GCCTCTAAGTCCGGTC  Ngn3-high-EP
#> GCCTCTATCGCTTAGA GCCTCTATCGCTTAGA   Ngn3-low-EP
#> GCGACCATCACCAGGC GCGACCATCACCAGGC     Endocrine
#> GCGAGAAGTGGGTATG GCGAGAAGTGGGTATG     Endocrine
#> GCGCAACGTTTCGCTC GCGCAACGTTTCGCTC     Endocrine
#> GCGCAACTCACAACGT GCGCAACTCACAACGT        Ductal
#> GCGCAGTGTGCTAGCC GCGCAGTGTGCTAGCC Pre-endocrine
#> GCGCCAAAGCTCCTTC GCGCCAAAGCTCCTTC     Endocrine
#> GCGCCAATCTTATCTG GCGCCAATCTTATCTG Pre-endocrine
#> GCGCGATGTCCGAATT GCGCGATGTCCGAATT     Endocrine
#> GCGGGTTAGACTTGAA GCGGGTTAGACTTGAA  Ngn3-high-EP
#> GCGGGTTCAAGTAATG GCGGGTTCAAGTAATG     Endocrine
#> GCGGGTTGTTACTGAC GCGGGTTGTTACTGAC        Ductal
#> GCTCCTAAGGGCATGT GCTCCTAAGGGCATGT     Endocrine
#> GCTCTGTGTCCATGAT GCTCTGTGTCCATGAT Pre-endocrine
#> GCTGCAGGTTACCGAT GCTGCAGGTTACCGAT        Ductal
#> GCTGCGAAGAACAACT GCTGCGAAGAACAACT     Endocrine
#> GCTGCGAAGCTAGCCC GCTGCGAAGCTAGCCC   Ngn3-low-EP
#> GCTGCGAAGTATTGGA GCTGCGAAGTATTGGA  Ngn3-high-EP
#> GCTGCGATCCCGGATG GCTGCGATCCCGGATG Pre-endocrine
#> GCTGCGATCGGCTACG GCTGCGATCGGCTACG     Endocrine
#> GCTGCTTGTCTTCAAG GCTGCTTGTCTTCAAG        Ductal
#> GCTGGGTGTCATACTG GCTGGGTGTCATACTG     Endocrine
#> GCTGGGTGTCTAGAGG GCTGGGTGTCTAGAGG  Ngn3-high-EP
#> GCTTCCAAGACATAAC GCTTCCAAGACATAAC     Endocrine
#> GCTTCCAAGTTAAGTG GCTTCCAAGTTAAGTG     Endocrine
#> GCTTGAAGTCAACTGT GCTTGAAGTCAACTGT     Endocrine
#> GGAAAGCCAATGTAAG GGAAAGCCAATGTAAG Pre-endocrine
#> GGAAAGCGTCTTGATG GGAAAGCGTCTTGATG        Ductal
#> GGAATAAGTAAGAGAG GGAATAAGTAAGAGAG     Endocrine
#> GGAATAAGTTCGGGCT GGAATAAGTTCGGGCT        Ductal
#> GGACAAGGTGATAAGT GGACAAGGTGATAAGT        Ductal
#> GGACAAGTCAAAGACA GGACAAGTCAAAGACA  Ngn3-high-EP
#> GGACAGAAGGCCGAAT GGACAGAAGGCCGAAT     Endocrine
#> GGACAGACAATCCAAC GGACAGACAATCCAAC Pre-endocrine
#> GGACAGATCAGGCGAA GGACAGATCAGGCGAA     Endocrine
#> GGACAGATCCTGCAGG GGACAGATCCTGCAGG        Ductal
#> GGACAGATCCTTTCGG GGACAGATCCTTTCGG  Ngn3-high-EP
#> GGACATTGTCTCCCTA GGACATTGTCTCCCTA     Endocrine
#> GGACGTCAGGGTGTTG GGACGTCAGGGTGTTG Pre-endocrine
#> GGACGTCCACGCATCG GGACGTCCACGCATCG   Ngn3-low-EP
#> GGACGTCCATGGATGG GGACGTCCATGGATGG  Ngn3-high-EP
#> GGACGTCGTCAGAAGC GGACGTCGTCAGAAGC Pre-endocrine
#> GGACGTCGTCGAGATG GGACGTCGTCGAGATG     Endocrine
#> GGACGTCGTCTAGGTT GGACGTCGTCTAGGTT     Endocrine
#> GGACGTCGTTTAGCTG GGACGTCGTTTAGCTG        Ductal
#> GGAGCAAAGCTTCGCG GGAGCAAAGCTTCGCG        Ductal
#> GGAGCAAGTATCACCA GGAGCAAGTATCACCA Pre-endocrine
#> GGATGTTAGTAAGTAC GGATGTTAGTAAGTAC     Endocrine
#> GGATGTTTCCAGTATG GGATGTTTCCAGTATG  Ngn3-high-EP
#> GGCAATTCACGGCTAC GGCAATTCACGGCTAC     Endocrine
#> GGCAATTCATCTCCCA GGCAATTCATCTCCCA  Ngn3-high-EP
#> GGCAATTGTAGAGCTG GGCAATTGTAGAGCTG     Endocrine
#> GGCCGATTCACTCTTA GGCCGATTCACTCTTA   Ngn3-low-EP
#> GGCGACTGTAAGTTCC GGCGACTGTAAGTTCC     Endocrine
#> GGCGTGTCACCAGGTC GGCGTGTCACCAGGTC  Ngn3-high-EP
#> GGCGTGTCACCGATAT GGCGTGTCACCGATAT Pre-endocrine
#> GGCGTGTTCAGCTTAG GGCGTGTTCAGCTTAG     Endocrine
#> GGCGTGTTCGAGAGCA GGCGTGTTCGAGAGCA Pre-endocrine
#> GGCTCGAAGATCACGG GGCTCGAAGATCACGG Pre-endocrine
#> GGCTCGAAGTGACTCT GGCTCGAAGTGACTCT     Endocrine
#> GGCTCGACAGCTTCGG GGCTCGACAGCTTCGG     Endocrine
#> GGCTGGTAGTCACGCC GGCTGGTAGTCACGCC  Ngn3-high-EP
#> GGCTGGTTCATGCATG GGCTGGTTCATGCATG  Ngn3-high-EP
#> GGGAATGAGCACACAG GGGAATGAGCACACAG     Endocrine
#> GGGAATGAGTGTACGG GGGAATGAGTGTACGG        Ductal
#> GGGAATGCAAAGTGCG GGGAATGCAAAGTGCG     Endocrine
#> GGGAATGTCACAAACC GGGAATGTCACAAACC  Ngn3-high-EP
#> GGGACCTCACTGTCGG GGGACCTCACTGTCGG Pre-endocrine
#> GGGACCTTCGAATGCT GGGACCTTCGAATGCT        Ductal
#> GGGAGATAGATGTGGC GGGAGATAGATGTGGC     Endocrine
#> GGGAGATAGCGAAGGG GGGAGATAGCGAAGGG     Endocrine
#> GGGAGATAGTGACATA GGGAGATAGTGACATA     Endocrine
#> GGGATGAAGGGCATGT GGGATGAAGGGCATGT     Endocrine
#> GGGATGAGTCTGCGGT GGGATGAGTCTGCGGT     Endocrine
#> GGGATGAGTTGTGGAG GGGATGAGTTGTGGAG  Ngn3-high-EP
#> GGGCACTCATTTCAGG GGGCACTCATTTCAGG        Ductal
#> GGGCACTGTCTCCATC GGGCACTGTCTCCATC Pre-endocrine
#> GGGCACTGTGGCAAAC GGGCACTGTGGCAAAC        Ductal
#> GGGCATCCATGACATC GGGCATCCATGACATC        Ductal
#> GGGCATCCATTTCAGG GGGCATCCATTTCAGG     Endocrine
#> GGGCATCGTGGTCTCG GGGCATCGTGGTCTCG  Ngn3-high-EP
#> GGGTCTGCACAGGCCT GGGTCTGCACAGGCCT  Ngn3-high-EP
#> GGGTCTGCATGAAGTA GGGTCTGCATGAAGTA  Ngn3-high-EP
#> GGGTCTGTCATGTGGT GGGTCTGTCATGTGGT Pre-endocrine
#> GGGTCTGTCCATGAAC GGGTCTGTCCATGAAC     Endocrine
#> GGGTTGCCAAGCTGAG GGGTTGCCAAGCTGAG   Ngn3-low-EP
#> GGGTTGCTCGAACGGA GGGTTGCTCGAACGGA        Ductal
#> GGTATTGGTACTCGCG GGTATTGGTACTCGCG  Ngn3-high-EP
#> GGTATTGGTCCCGACA GGTATTGGTCCCGACA        Ductal
#> GGTGTTAAGGATCGCA GGTGTTAAGGATCGCA        Ductal
#> GGTGTTAGTTCCTCCA GGTGTTAGTTCCTCCA        Ductal
#> GTAACGTGTCACTGGC GTAACGTGTCACTGGC        Ductal
#> GTAACTGGTCACTGGC GTAACTGGTCACTGGC Pre-endocrine
#> GTAACTGTCAGTGCAT GTAACTGTCAGTGCAT        Ductal
#> GTACGTAGTCTCTTTA GTACGTAGTCTCTTTA     Endocrine
#> GTACTCCCACAGGTTT GTACTCCCACAGGTTT Pre-endocrine
#> GTACTCCCACGTCTCT GTACTCCCACGTCTCT   Ngn3-low-EP
#> GTACTCCTCCAACCAA GTACTCCTCCAACCAA  Ngn3-high-EP
#> GTACTTTGTACCGTAT GTACTTTGTACCGTAT     Endocrine
#> GTACTTTTCTTCGGTC GTACTTTTCTTCGGTC     Endocrine
#> GTAGGCCAGCTAACAA GTAGGCCAGCTAACAA Pre-endocrine
#> GTAGGCCGTTACCAGT GTAGGCCGTTACCAGT     Endocrine
#> GTAGTCACATCGATGT GTAGTCACATCGATGT  Ngn3-high-EP
#> GTAGTCAGTCCGACGT GTAGTCAGTCCGACGT  Ngn3-high-EP
#> GTATCTTCAGTGGGAT GTATCTTCAGTGGGAT        Ductal
#> GTATCTTCATCGATGT GTATCTTCATCGATGT  Ngn3-high-EP
#> GTATCTTGTACTCAAC GTATCTTGTACTCAAC     Endocrine
#> GTATCTTGTCGCGGTT GTATCTTGTCGCGGTT  Ngn3-high-EP
#> GTATCTTGTGGCCCTA GTATCTTGTGGCCCTA  Ngn3-high-EP
#> GTATCTTTCGTGGACC GTATCTTTCGTGGACC Pre-endocrine
#> GTATTCTCACATTAGC GTATTCTCACATTAGC        Ductal
#> GTATTCTCACTTGGAT GTATTCTCACTTGGAT        Ductal
#> GTATTCTGTCCGTCAG GTATTCTGTCCGTCAG   Ngn3-low-EP
#> GTATTCTTCTCTAAGG GTATTCTTCTCTAAGG     Endocrine
#> GTCAAGTGTGGTCCGT GTCAAGTGTGGTCCGT        Ductal
#> GTCACAACACGTCTCT GTCACAACACGTCTCT  Ngn3-high-EP
#> GTCACGGAGCTATGCT GTCACGGAGCTATGCT     Endocrine
#> GTCACGGCATCCGTGG GTCACGGCATCCGTGG Pre-endocrine
#> GTCACGGTCTTGCCGT GTCACGGTCTTGCCGT Pre-endocrine
#> GTCATTTGTCGTCTTC GTCATTTGTCGTCTTC     Endocrine
#> GTCCTCACACCACGTG GTCCTCACACCACGTG     Endocrine
#> GTCCTCATCATTTGGG GTCCTCATCATTTGGG  Ngn3-high-EP
#> GTCCTCATCTGGAGCC GTCCTCATCTGGAGCC  Ngn3-high-EP
#> GTCGGGTCAGGCTGAA GTCGGGTCAGGCTGAA     Endocrine
#> GTCGTAAAGTTTAGGA GTCGTAAAGTTTAGGA     Endocrine
#> GTCTCGTAGGCTAGAC GTCTCGTAGGCTAGAC  Ngn3-high-EP
#> GTCTCGTCATAGTAAG GTCTCGTCATAGTAAG  Ngn3-high-EP
#> GTCTCGTTCACTTCAT GTCTCGTTCACTTCAT  Ngn3-high-EP
#> GTCTCGTTCTGCGTAA GTCTCGTTCTGCGTAA     Endocrine
#> GTCTTCGTCCGTTGCT GTCTTCGTCCGTTGCT     Endocrine
#> GTCTTCGTCTACCAGA GTCTTCGTCTACCAGA Pre-endocrine
#> GTGCATAAGAACAATC GTGCATAAGAACAATC Pre-endocrine
#> GTGCATAAGCTCCTCT GTGCATAAGCTCCTCT        Ductal
#> GTGCATAGTTCAACCA GTGCATAGTTCAACCA     Endocrine
#> GTGCATATCAAGGCTT GTGCATATCAAGGCTT     Endocrine
#> GTGCGGTAGTAGGCCA GTGCGGTAGTAGGCCA        Ductal
#> GTGCGGTCAGCGTAAG GTGCGGTCAGCGTAAG  Ngn3-high-EP
#> GTGCTTCAGAGGGATA GTGCTTCAGAGGGATA     Endocrine
#> GTGCTTCTCACGACTA GTGCTTCTCACGACTA     Endocrine
#> GTGGGTCCATAAAGGT GTGGGTCCATAAAGGT     Endocrine
#> GTGGGTCCATCGATTG GTGGGTCCATCGATTG     Endocrine
#> GTGGGTCGTCCAGTAT GTGGGTCGTCCAGTAT     Endocrine
#> GTGGGTCTCCGAATGT GTGGGTCTCCGAATGT     Endocrine
#> GTGTGCGGTGTAAGTA GTGTGCGGTGTAAGTA     Endocrine
#> GTGTTAGCACCATCCT GTGTTAGCACCATCCT        Ductal
#> GTGTTAGGTGAACCTT GTGTTAGGTGAACCTT Pre-endocrine
#> GTTAAGCAGGATTCGG GTTAAGCAGGATTCGG  Ngn3-high-EP
#> GTTACAGTCCGATATG GTTACAGTCCGATATG  Ngn3-high-EP
#> GTTCATTAGAAGATTC GTTCATTAGAAGATTC   Ngn3-low-EP
#> GTTCATTAGGCAGTCA GTTCATTAGGCAGTCA Pre-endocrine
#> GTTCATTTCCGAACGC GTTCATTTCCGAACGC     Endocrine
#> GTTCTCGAGAATTCCC GTTCTCGAGAATTCCC     Endocrine
#> GTTCTCGCAAGAAAGG GTTCTCGCAAGAAAGG     Endocrine
#> GTTCTCGCAGACACTT GTTCTCGCAGACACTT        Ductal
#> GTTTCTAAGAAGATTC GTTTCTAAGAAGATTC     Endocrine
#> GTTTCTACAGGACCCT GTTTCTACAGGACCCT     Endocrine
#> TAAGAGATCTGCGACG TAAGAGATCTGCGACG Pre-endocrine
#> TAAGTGCAGGGTTTCT TAAGTGCAGGGTTTCT        Ductal
#> TAAGTGCTCCAAATGC TAAGTGCTCCAAATGC     Endocrine
#> TACACGACAACGATCT TACACGACAACGATCT        Ductal
#> TACACGACATGTAGTC TACACGACATGTAGTC     Endocrine
#> TACACGAGTGCAACTT TACACGAGTGCAACTT  Ngn3-high-EP
#> TACAGTGCAATCTACG TACAGTGCAATCTACG   Ngn3-low-EP
#> TACAGTGCACAGGCCT TACAGTGCACAGGCCT     Endocrine
#> TACAGTGGTAAACGCG TACAGTGGTAAACGCG Pre-endocrine
#> TACCTTAAGTACATGA TACCTTAAGTACATGA        Ductal
#> TACCTTATCCGATATG TACCTTATCCGATATG     Endocrine
#> TACGGATAGAGCTGGT TACGGATAGAGCTGGT        Ductal
#> TACGGATAGGCACATG TACGGATAGGCACATG     Endocrine
#> TACGGATAGTTTAGGA TACGGATAGTTTAGGA   Ngn3-low-EP
#> TACGGATGTGTTCGAT TACGGATGTGTTCGAT        Ductal
#> TACGGATTCCAAGTAC TACGGATTCCAAGTAC  Ngn3-high-EP
#> TACGGGCAGCCAACAG TACGGGCAGCCAACAG     Endocrine
#> TACGGGCAGCGTCAAG TACGGGCAGCGTCAAG        Ductal
#> TACGGGCTCTTCGGTC TACGGGCTCTTCGGTC     Endocrine
#> TACGGTACATGTTCCC TACGGTACATGTTCCC        Ductal
#> TACTCATAGGTGTTAA TACTCATAGGTGTTAA Pre-endocrine
#> TACTCATCAGATCCAT TACTCATCAGATCCAT     Endocrine
#> TACTCGCAGTAAGTAC TACTCGCAGTAAGTAC     Endocrine
#> TACTCGCCAGATCGGA TACTCGCCAGATCGGA     Endocrine
#> TACTCGCGTCGGCATC TACTCGCGTCGGCATC     Endocrine
#> TACTTACCAACTGCGC TACTTACCAACTGCGC        Ductal
#> TACTTACCATGGGACA TACTTACCATGGGACA  Ngn3-high-EP
#> TACTTGTAGACAAAGG TACTTGTAGACAAAGG     Endocrine
#> TAGACCAAGGAATCGC TAGACCAAGGAATCGC        Ductal
#> TAGAGCTGTATGAAAC TAGAGCTGTATGAAAC        Ductal
#> TAGAGCTGTTGTCGCG TAGAGCTGTTGTCGCG        Ductal
#> TAGCCGGTCAACACAC TAGCCGGTCAACACAC        Ductal
#> TAGGCATTCCAAAGTC TAGGCATTCCAAAGTC   Ngn3-low-EP
#> TAGTGGTCAACTGCGC TAGTGGTCAACTGCGC        Ductal
#> TAGTGGTCATTCACTT TAGTGGTCATTCACTT Pre-endocrine
#> TAGTGGTTCCTCAACC TAGTGGTTCCTCAACC Pre-endocrine
#> TAGTTGGCACGTAAGG TAGTTGGCACGTAAGG  Ngn3-high-EP
#> TAGTTGGCAGTAACGG TAGTTGGCAGTAACGG Pre-endocrine
#> TAGTTGGGTACCGTAT TAGTTGGGTACCGTAT        Ductal
#> TAGTTGGTCTTGCAAG TAGTTGGTCTTGCAAG     Endocrine
#> TATCAGGCACCAGATT TATCAGGCACCAGATT        Ductal
#> TATCTCACAACTGCTA TATCTCACAACTGCTA        Ductal
#> TATCTCACACGCGAAA TATCTCACACGCGAAA     Endocrine
#> TATCTCACATTGTGCA TATCTCACATTGTGCA     Endocrine
#> TATCTCAGTTCGCTAA TATCTCAGTTCGCTAA        Ductal
#> TATGCCCAGAACAATC TATGCCCAGAACAATC Pre-endocrine
#> TATGCCCGTCTAGCCG TATGCCCGTCTAGCCG  Ngn3-high-EP
#> TATGCCCTCTTACCTA TATGCCCTCTTACCTA   Ngn3-low-EP
#> TATTACCTCGTTGCCT TATTACCTCGTTGCCT     Endocrine
#> TCAACGATCAACCATG TCAACGATCAACCATG Pre-endocrine
#> TCAATCTCATCCGCGA TCAATCTCATCCGCGA  Ngn3-high-EP
#> TCAATCTCATCTCCCA TCAATCTCATCTCCCA   Ngn3-low-EP
#> TCAATCTGTCAAAGAT TCAATCTGTCAAAGAT   Ngn3-low-EP
#> TCAATCTTCGAACGGA TCAATCTTCGAACGGA     Endocrine
#> TCACAAGAGTGACATA TCACAAGAGTGACATA     Endocrine
#> TCACAAGCAACGATGG TCACAAGCAACGATGG     Endocrine
#> TCACAAGCAGACTCGC TCACAAGCAGACTCGC     Endocrine
#> TCACGAAGTCCGAGTC TCACGAAGTCCGAGTC  Ngn3-high-EP
#> TCACGAATCCTATGTT TCACGAATCCTATGTT   Ngn3-low-EP
#> TCAGATGCACTCGACG TCAGATGCACTCGACG Pre-endocrine
#> TCAGATGGTACACCGC TCAGATGGTACACCGC     Endocrine
#> TCAGCAACACCAGGCT TCAGCAACACCAGGCT        Ductal
#> TCAGCAATCGCCGTGA TCAGCAATCGCCGTGA Pre-endocrine
#> TCAGCTCAGTCGTACT TCAGCTCAGTCGTACT   Ngn3-low-EP
#> TCAGGTAAGGCGTACA TCAGGTAAGGCGTACA  Ngn3-high-EP
#> TCAGGTAAGTCAATAG TCAGGTAAGTCAATAG        Ductal
#> TCAGGTACAGTCACTA TCAGGTACAGTCACTA     Endocrine
#> TCAGGTATCTGTCCGT TCAGGTATCTGTCCGT     Endocrine
#> TCATTACGTCAGAAGC TCATTACGTCAGAAGC        Ductal
#> TCATTTGCATTGGCGC TCATTTGCATTGGCGC Pre-endocrine
#> TCCACACCAGGCGATA TCCACACCAGGCGATA     Endocrine
#> TCCCGATAGTCGTTTG TCCCGATAGTCGTTTG Pre-endocrine
#> TCCCGATCAACGATGG TCCCGATCAACGATGG  Ngn3-high-EP
#> TCGAGGCAGAACAATC TCGAGGCAGAACAATC     Endocrine
#> TCGAGGCAGGCATGGT TCGAGGCAGGCATGGT Pre-endocrine
#> TCGCGAGAGTACGCGA TCGCGAGAGTACGCGA Pre-endocrine
#> TCGCGAGAGTCCGTAT TCGCGAGAGTCCGTAT     Endocrine
#> TCGCGAGCACTTCTGC TCGCGAGCACTTCTGC Pre-endocrine
#> TCGGGACAGAGAACAG TCGGGACAGAGAACAG  Ngn3-high-EP
#> TCGGGACGTCTGCGGT TCGGGACGTCTGCGGT     Endocrine
#> TCGTACCCACGCATCG TCGTACCCACGCATCG   Ngn3-low-EP
#> TCGTACCCATATACGC TCGTACCCATATACGC        Ductal
#> TCTATTGCACAGGAGT TCTATTGCACAGGAGT        Ductal
#> TCTATTGTCCTATTCA TCTATTGTCCTATTCA     Endocrine
#> TCTATTGTCGTATCAG TCTATTGTCGTATCAG Pre-endocrine
#> TCTCATAAGAATGTGT TCTCATAAGAATGTGT Pre-endocrine
#> TCTCATACAAATTGCC TCTCATACAAATTGCC     Endocrine
#> TCTCATAGTGGACGAT TCTCATAGTGGACGAT  Ngn3-high-EP
#> TCTCTAAAGCTGGAAC TCTCTAAAGCTGGAAC     Endocrine
#> TCTCTAAGTCGCATCG TCTCTAAGTCGCATCG        Ductal
#> TCTCTAAGTGGCAAAC TCTCTAAGTGGCAAAC  Ngn3-high-EP
#> TCTCTAAGTTACCGAT TCTCTAAGTTACCGAT        Ductal
#> TCTCTAATCCCAACGG TCTCTAATCCCAACGG Pre-endocrine
#> TCTGAGAGTCAAACTC TCTGAGAGTCAAACTC        Ductal
#> TCTGGAACACACGCTG TCTGGAACACACGCTG        Ductal
#> TCTGGAACACCTATCC TCTGGAACACCTATCC     Endocrine
#> TCTGGAAGTCATCGGC TCTGGAAGTCATCGGC     Endocrine
#> TCTGGAATCGGTGTCG TCTGGAATCGGTGTCG        Ductal
#> TCTTTCCGTGCAACTT TCTTTCCGTGCAACTT     Endocrine
#> TCTTTCCTCGTCTGCT TCTTTCCTCGTCTGCT   Ngn3-low-EP
#> TGAAAGAGTTATCACG TGAAAGAGTTATCACG   Ngn3-low-EP
#> TGACGGCAGGAATGGA TGACGGCAGGAATGGA        Ductal
#> TGACGGCCATATGAGA TGACGGCCATATGAGA     Endocrine
#> TGACTAGGTGTATGGG TGACTAGGTGTATGGG  Ngn3-high-EP
#> TGACTAGTCCACGTGG TGACTAGTCCACGTGG   Ngn3-low-EP
#> TGACTAGTCCTATTCA TGACTAGTCCTATTCA  Ngn3-high-EP
#> TGACTTTAGCCAGAAC TGACTTTAGCCAGAAC     Endocrine
#> TGACTTTAGCGTTGCC TGACTTTAGCGTTGCC        Ductal
#> TGACTTTAGCGTTTAC TGACTTTAGCGTTTAC        Ductal
#> TGAGAGGAGATCCCAT TGAGAGGAGATCCCAT     Endocrine
#> TGAGAGGAGCCAGGAT TGAGAGGAGCCAGGAT     Endocrine
#> TGAGAGGAGCCGTCGT TGAGAGGAGCCGTCGT  Ngn3-high-EP
#> TGAGAGGAGGCGATAC TGAGAGGAGGCGATAC     Endocrine
#> TGAGAGGAGGTAAACT TGAGAGGAGGTAAACT     Endocrine
#> TGAGAGGCAGGAACGT TGAGAGGCAGGAACGT     Endocrine
#> TGAGAGGGTAAGGGCT TGAGAGGGTAAGGGCT        Ductal
#> TGAGCATGTTAAAGAC TGAGCATGTTAAAGAC  Ngn3-high-EP
#> TGAGCATTCACCCGAG TGAGCATTCACCCGAG        Ductal
#> TGAGCATTCGGGAGTA TGAGCATTCGGGAGTA        Ductal
#> TGAGCCGTCATGTCCC TGAGCCGTCATGTCCC        Ductal
#> TGAGCCGTCCGAACGC TGAGCCGTCCGAACGC        Ductal
#> TGAGCCGTCCGCTGTT TGAGCCGTCCGCTGTT  Ngn3-high-EP
#> TGAGGGAAGAGGTACC TGAGGGAAGAGGTACC  Ngn3-high-EP
#> TGAGGGACAGACTCGC TGAGGGACAGACTCGC        Ductal
#> TGATTTCAGTACGCCC TGATTTCAGTACGCCC  Ngn3-high-EP
#> TGATTTCAGTGACTCT TGATTTCAGTGACTCT        Ductal
#> TGATTTCGTGAGGGTT TGATTTCGTGAGGGTT     Endocrine
#> TGCCAAACATGACATC TGCCAAACATGACATC  Ngn3-high-EP
#> TGCCCATCACTGTGTA TGCCCATCACTGTGTA   Ngn3-low-EP
#> TGCCCTAAGTCCGGTC TGCCCTAAGTCCGGTC Pre-endocrine
#> TGCGCAGGTACGCACC TGCGCAGGTACGCACC        Ductal
#> TGCGCAGTCTGCCAGG TGCGCAGTCTGCCAGG   Ngn3-low-EP
#> TGCGGGTAGACGCACA TGCGGGTAGACGCACA  Ngn3-high-EP
#> TGCGGGTAGGGTTCCC TGCGGGTAGGGTTCCC     Endocrine
#> TGCGGGTTCCACTCCA TGCGGGTTCCACTCCA     Endocrine
#> TGCGGGTTCTCAAACG TGCGGGTTCTCAAACG        Ductal
#> TGCGTGGAGGTAAACT TGCGTGGAGGTAAACT   Ngn3-low-EP
#> TGCGTGGAGGTTCCTA TGCGTGGAGGTTCCTA Pre-endocrine
#> TGCGTGGAGTACACCT TGCGTGGAGTACACCT     Endocrine
#> TGCGTGGGTCCCTTGT TGCGTGGGTCCCTTGT Pre-endocrine
#> TGCGTGGGTTACTGAC TGCGTGGGTTACTGAC Pre-endocrine
#> TGCTACCCAGGGCATA TGCTACCCAGGGCATA   Ngn3-low-EP
#> TGCTACCCATAAGACA TGCTACCCATAAGACA  Ngn3-high-EP
#> TGCTGCTAGGATGCGT TGCTGCTAGGATGCGT  Ngn3-high-EP
#> TGCTGCTGTCCGTCAG TGCTGCTGTCCGTCAG        Ductal
#> TGGACGCAGTGTTGAA TGGACGCAGTGTTGAA   Ngn3-low-EP
#> TGGACGCTCAGGTAAA TGGACGCTCAGGTAAA        Ductal
#> TGGACGCTCTTGTTTG TGGACGCTCTTGTTTG Pre-endocrine
#> TGGCCAGAGCTACCTA TGGCCAGAGCTACCTA        Ductal
#> TGGCCAGCAAGGACTG TGGCCAGCAAGGACTG     Endocrine
#> TGGCCAGCAATGAAAC TGGCCAGCAATGAAAC Pre-endocrine
#> TGGCCAGCACGAAAGC TGGCCAGCACGAAAGC        Ductal
#> TGGCCAGGTCGGCATC TGGCCAGGTCGGCATC        Ductal
#> TGGCGCATCACAACGT TGGCGCATCACAACGT        Ductal
#> TGGCTGGGTACCCAAT TGGCTGGGTACCCAAT     Endocrine
#> TGGGAAGCACGTAAGG TGGGAAGCACGTAAGG Pre-endocrine
#> TGGGAAGCATGACATC TGGGAAGCATGACATC        Ductal
#> TGGGCGTGTGTGCGTC TGGGCGTGTGTGCGTC     Endocrine
#> TGGTTAGCAGTCGTGC TGGTTAGCAGTCGTGC Pre-endocrine
#> TGGTTCCCACCGCTAG TGGTTCCCACCGCTAG        Ductal
#> TGGTTCCGTCACCTAA TGGTTCCGTCACCTAA        Ductal
#> TGTATTCCAATGACCT TGTATTCCAATGACCT        Ductal
#> TGTCCCAAGTTTAGGA TGTCCCAAGTTTAGGA   Ngn3-low-EP
#> TGTCCCACATTATCTC TGTCCCACATTATCTC     Endocrine
#> TGTCCCAGTCCGTGAC TGTCCCAGTCCGTGAC     Endocrine
#> TGTCCCATCTCTGCTG TGTCCCATCTCTGCTG     Endocrine
#> TGTGGTACAAGACGTG TGTGGTACAAGACGTG        Ductal
#> TGTGGTACACATCCGG TGTGGTACACATCCGG     Endocrine
#> TGTGGTAGTGCCTGCA TGTGGTAGTGCCTGCA     Endocrine
#> TGTGGTATCCAGTAGT TGTGGTATCCAGTAGT  Ngn3-high-EP
#> TGTGTTTAGGAATGGA TGTGTTTAGGAATGGA     Endocrine
#> TGTGTTTGTAGATTAG TGTGTTTGTAGATTAG     Endocrine
#> TGTGTTTGTATGAATG TGTGTTTGTATGAATG Pre-endocrine
#> TTAACTCCAAAGAATC TTAACTCCAAAGAATC        Ductal
#> TTAACTCCAGGATTGG TTAACTCCAGGATTGG     Endocrine
#> TTAACTCGTAATCGTC TTAACTCGTAATCGTC Pre-endocrine
#> TTAGGCAGTTTGTTGG TTAGGCAGTTTGTTGG Pre-endocrine
#> TTATGCTCACCCAGTG TTATGCTCACCCAGTG     Endocrine
#> TTCCCAGAGTTACCCA TTCCCAGAGTTACCCA  Ngn3-high-EP
#> TTCCCAGGTATTCTCT TTCCCAGGTATTCTCT   Ngn3-low-EP
#> TTCCCAGTCATAGCAC TTCCCAGTCATAGCAC Pre-endocrine
#> TTCGAAGAGTACGCCC TTCGAAGAGTACGCCC  Ngn3-high-EP
#> TTCGGTCAGCTAGCCC TTCGGTCAGCTAGCCC  Ngn3-high-EP
#> TTCGGTCAGGGCATGT TTCGGTCAGGGCATGT     Endocrine
#> TTCGGTCGTATAGTAG TTCGGTCGTATAGTAG     Endocrine
#> TTCGGTCTCGACCAGC TTCGGTCTCGACCAGC Pre-endocrine
#> TTCTACAAGATCGATA TTCTACAAGATCGATA   Ngn3-low-EP
#> TTCTACACATAAAGGT TTCTACACATAAAGGT Pre-endocrine
#> TTCTACAGTACTCTCC TTCTACAGTACTCTCC   Ngn3-low-EP
#> TTCTACATCGCTTAGA TTCTACATCGCTTAGA     Endocrine
#> TTCTACATCTGCAGTA TTCTACATCTGCAGTA        Ductal
#> TTCTCAAAGCCGCCTA TTCTCAAAGCCGCCTA        Ductal
#> TTCTCAACAATAGAGT TTCTCAACAATAGAGT  Ngn3-high-EP
#> TTCTCCTAGTCCATAC TTCTCCTAGTCCATAC     Endocrine
#> TTCTCCTCAATGGTCT TTCTCCTCAATGGTCT        Ductal
#> TTCTTAGTCAGTGTTG TTCTTAGTCAGTGTTG     Endocrine
#> TTGAACGAGAGCAATT TTGAACGAGAGCAATT     Endocrine
#> TTGAACGAGGAGTTTA TTGAACGAGGAGTTTA  Ngn3-high-EP
#> TTGAACGGTGAGGGAG TTGAACGGTGAGGGAG     Endocrine
#> TTGAACGGTGATGCCC TTGAACGGTGATGCCC        Ductal
#> TTGACTTAGACAAGCC TTGACTTAGACAAGCC        Ductal
#> TTGACTTGTTCCATGA TTGACTTGTTCCATGA  Ngn3-high-EP
#> TTGACTTTCACCGGGT TTGACTTTCACCGGGT Pre-endocrine
#> TTGACTTTCAGCAACT TTGACTTTCAGCAACT        Ductal
#> TTGACTTTCCAGTAGT TTGACTTTCCAGTAGT        Ductal
#> TTGCCGTCACCGAATT TTGCCGTCACCGAATT     Endocrine
#> TTGCCGTTCTCTGTCG TTGCCGTTCTCTGTCG        Ductal
#> TTGCGTCCACCGATAT TTGCGTCCACCGATAT  Ngn3-high-EP
#> TTGGAACAGAAGATTC TTGGAACAGAAGATTC     Endocrine
#> TTGGAACGTATATGAG TTGGAACGTATATGAG     Endocrine
#> TTGGCAAAGAGTAAGG TTGGCAAAGAGTAAGG     Endocrine
#> TTGTAGGTCAAAGTAG TTGTAGGTCAAAGTAG  Ngn3-high-EP
#> TTTACTGCAGCATACT TTTACTGCAGCATACT  Ngn3-high-EP
#> TTTACTGGTGCTAGCC TTTACTGGTGCTAGCC        Ductal
#> TTTATGCAGGTTACCT TTTATGCAGGTTACCT     Endocrine
#> TTTATGCGTCGAACAG TTTATGCGTCGAACAG        Ductal
#> TTTATGCTCCATTCTA TTTATGCTCCATTCTA        Ductal
#> TTTCCTCCAGGATCGA TTTCCTCCAGGATCGA     Endocrine
#> TTTCCTCGTGGCGAAT TTTCCTCGTGGCGAAT Pre-endocrine
#> TTTGCGCAGACAGACC TTTGCGCAGACAGACC        Ductal
#> TTTGGTTAGACAGGCT TTTGGTTAGACAGGCT     Endocrine
#> TTTGGTTCACCAGATT TTTGGTTCACCAGATT        Ductal
#> TTTGGTTCACGAAGCA TTTGGTTCACGAAGCA  Ngn3-high-EP
#> TTTGGTTTCCTTTCGG TTTGGTTTCCTTTCGG     Endocrine
#> TTTGTCAAGAATGTGT TTTGTCAAGAATGTGT Pre-endocrine
#> TTTGTCATCGAATGCT TTTGTCATCGAATGCT     Endocrine
#> TTTGTCATCTGTTTGT TTTGTCATCTGTTTGT     Endocrine
#> 
#> $feature_metadata
#>          features features_uique duplicated feature_split index
#> AUCell_A AUCell_A       AUCell_A      FALSE            NA     1
#> GSVA_A     GSVA_A         GSVA_A      FALSE            NA     2
#> Sox9         Sox9           Sox9      FALSE            NA     3
#> Anxa2       Anxa2          Anxa2      FALSE            NA     4
#> Bicc1       Bicc1          Bicc1      FALSE            NA     5
#> 
#> $enrichment
#> NULL
#>