This function performs doublet-calling using the scDblFinder package on a Seurat object.
Usage
db_scDblFinder(srt, assay = "RNA", db_rate = ncol(srt)/1000 * 0.01, ...)Arguments
- srt
A Seurat object.
- assay
The name of the assay to be used for doublet-calling. Default is
"RNA".- db_rate
The expected doublet rate. Default is calculated as
ncol(srt) / 1000 * 0.01.- ...
Additional arguments to be passed to
scDblFinder::scDblFinder().