The CSNObject object is an extended Seurat object for the storage and analysis of celltype-specific gene regulatory networks.

Slots

data

Seurat object.

metadata

A list with metadata about the object.

regions

A Regions object containing information about the genomic regions included in the network.

networks

A Network object containing the inferred regulatory network and information about the model fit.

params

A list storing parameters for network inference.

active_network

A string indicating the active network.