Plot perturbation trajectory

Plot perturbation trajectory

plotPerturbationTrajectory(
  object,
  genes = NULL,
  show_heatmap = FALSE,
  n_top_genes = 50,
  heatmap_style = "combined",
  ...
)

# S4 method for class 'Network'
plotPerturbationTrajectory(
  object,
  genes = NULL,
  show_heatmap = FALSE,
  n_top_genes = 50,
  heatmap_style = "combined",
  ...
)

Arguments

object

Network or CSNObject

genes

Genes to plot

show_heatmap

Logical, whether to show expression heatmap

n_top_genes

Number of top variable genes to show in heatmap

heatmap_style

Style of heatmap visualization ("combined" or "separate")

...

Additional arguments

Value

ggplot object or list of plots