Calculates AUROC and AUPRC metrics with optional visualization
Usage
calculate_auc(
network_table,
ground_truth,
return_plot = FALSE,
line_color = "#1563cc",
line_width = 1,
tag_levels = "A",
tf_edges = FALSE
)Arguments
- network_table
A data frame of predicted network structure
- ground_truth
A data frame of ground truth network
- return_plot
Logical value indicating whether to generate plots
- line_color
Color for plot lines
- line_width
Width for plot lines
- tag_levels
Tag levels for plot annotations
- tf_edges
Whether to restrict candidate edges to TF-to-gene. Default is `FALSE`.